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  Home > Genomes > Tetraodon nigroviridis 69_8 > ENSTNIP00000000902

Domain assignment for ENSTNIP00000000902 from Tetraodon nigroviridis 69_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000000902
Domain Number 1 Region: 1553-1776
Classification Level Classification E-value
Superfamily Fibrinogen C-terminal domain-like 1.05e-80
Family Fibrinogen C-terminal domain-like 0.00000249
Further Details:      
 
Domain Number 2 Region: 840-1010
Classification Level Classification E-value
Superfamily Fibronectin type III 3.28e-21
Family Fibronectin type III 0.00044
Further Details:      
 
Domain Number 3 Region: 1290-1379
Classification Level Classification E-value
Superfamily Fibronectin type III 1.44e-20
Family Fibronectin type III 0.0000909
Further Details:      
 
Domain Number 4 Region: 1382-1541
Classification Level Classification E-value
Superfamily Fibronectin type III 1.18e-19
Family Fibronectin type III 0.0014
Further Details:      
 
Domain Number 5 Region: 571-748
Classification Level Classification E-value
Superfamily Fibronectin type III 2.09e-16
Family Fibronectin type III 0.0013
Further Details:      
 
Domain Number 6 Region: 747-837
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000373
Family Fibronectin type III 0.0000732
Further Details:      
 
Domain Number 7 Region: 1023-1109
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000286
Family Fibronectin type III 0.0018
Further Details:      
 
Domain Number 8 Region: 1205-1290
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000552
Family Fibronectin type III 0.002
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000000902
Domain Number - Region: 327-351
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000221
Family EGF-type module 0.062
Further Details:      
 
Domain Number - Region: 483-507
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000297
Family EGF-type module 0.059
Further Details:      
 
Domain Number - Region: 513-537
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00198
Family EGF-type module 0.031
Further Details:      
 
Domain Number - Region: 420-445
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00312
Family EGF-type module 0.049
Further Details:      
 
Domain Number - Region: 390-413
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0035
Family EGF-type module 0.061
Further Details:      
 
Domain Number - Region: 545-568
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0064
Family EGF-type module 0.02
Further Details:      
 
Domain Number - Region: 358-383
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0067
Family Integrin beta EGF-like domains 0.058
Further Details:      
 
Domain Number - Region: 265-289
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0168
Family Integrin beta EGF-like domains 0.079
Further Details:      
 
Domain Number - Region: 235-259
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0175
Family EGF-type module 0.044
Further Details:      
 
Domain Number - Region: 451-475
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0175
Family EGF-type module 0.049
Further Details:      
 
Domain Number - Region: 204-228
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0221
Family EGF-type module 0.027
Further Details:      
 
Domain Number - Region: 297-320
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0259
Family EGF-type module 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000000902   Gene: ENSTNIG00000010597   Transcript: ENSTNIT00000003851
Sequence length 1783
Comment pep:novel chromosome:TETRAODON8:Un_random:23981397:23997800:1 gene:ENSTNIG00000010597 transcript:ENSTNIT00000003851 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MGTKTILLVCLSVSLLFQLSAAGLVRKIIRHRRETLMPKKSQENLTLPHPDQPVVFNHVY
NINVPSTSLCSVDLDLPGEPEVKHKTPLRGVQNMEHIEHTEDGDNQIVFTHRITIPKQAC
SCENQLLDVKSILNRLEMLELELSSLREQCSGGAGCCGAQVAGEISTKPYCNGRGNWSSD
TCSCLCEVGWKGQNCSEPDCPGDCQDQGRCLNGRCECFEGFGGDDCSAELCLLDCGDYGH
CVSGVCLCEEGFSGQDCSQTNCLNSCLGRGRCLEDECVCDEPWTGLDCSELICPNDCYDR
GRCLNGTCECEQGYAGEDCGDLSCPGLCSNRGVCLNGQCVCQSGYSGDDCSKLTCPKNCN
EKGHCFNGKCICDPGREGEDCSVLSCPDNCNDRGQCVDGACVCDAGYQGEDCGALSCPNN
CLDRGNCVNGQCVCDKGYSGEDCSVKTCPKKCMERGDCVDGKCMCFPGFKGKDCGEMTCP
GDCSNQGRCESGKCVCHKGYTGEDCSLKTCPKNCHDRGYCIDGNCVCYEGFTGPDCSTLA
CPSDCQNQGHCKNGVCVCEEGFIGEDCSQVSPPKDLTVVEVTPETVDLSWDNEMRVSEYL
VKYVPTAPGGLELDMQVPGDQKKATILELEPGVEYLIRVYAVLNNKKSIPVDARVALDLP
KPDGLKFKSVRDTSVEVEWDPLDIPFDGWNLIFRNTKEEDGEILNSLGQPETTFEQSGLG
PGQEYEVKLEVVKNNKRGPPASKSVITMIDSPNQVDIRDVTDTTALLTWLPPVAEVEEVS
ISYGPSSNPADRNVVELPSTESQYHLGGLDPDTHYQVSLTAHKGDWSSKPVHESFLTELD
APKNLKTAEITDESITLEWENSRAQVDNYRIKYGPLSGGEHRELLFTPGAKDHTHAKITG
LRASTEYGMGVTAVKDERESLPTTTNAVTALDSPKDLTVTKVTETTMLLEWRHPQAKLDS
YRLVYVSADGHRREEVLPGDLKSYSLVDLSPGTLYTISISAERGSRTSAPNTVSAFTEEE
KPLVTSFTISDVSWDSLQLSWEAPDGAFQAFLVKVTDAETGSEVQNHSVVAGARSFAISD
LSATTWYRVSLYGLHRGALLGPVTADTITGSNVTAYPPLSFLFYSLNMQSQFSQYGLLSI
LLLPVGLGLGTAWPGGSRVVHNMAWAQLGPAVCMLMAAETSSTFFLSESLHPKKTQTIPE
AEPEIQALLVSAVTPGSFRLTWTAEEDALDTFVIMVSPADDPGHPTELVLASEQRSVAVT
NLTEDTQYKIQMFGLRFGRRTKSVQESVRTDLAPPKGIRFSDVTDTSTTVHWGAPRVRVD
SYQITYVPAHGGSAKTLTVDGSKSQTVLPNLTPGVTYEVTIVAVKGSRESLPASDSITTA
LDKPRGLVAVNITDTGALLLWQPAIATIDGYVITYSADAVDPVMERVSGNVMEFQMSSLV
PATRYTVKVFAARDLAKSAATSTEFTTDVDTPTHLAASSIQTESAMLTWKAPRASITGYI
LSFEAVDGTVREVVLSPTAVSYNMAQLSASTEYSVRLQAIAGPKRSRVVAAVFTTTGVQY
RHPRDCSQVLLNGDGASGPYTIFLGGDENQPLQVYCDMSTDGGGWIVFLRRQSGKLDFFR
NWKNYTSGFGDMNDEFWLGLSNLNKITAAAQYELRVDLRDKGETAFAQYDRFSVSEPRSR
YKVHVGGYSGTAGDSMTYHHGRPFSTYDHDNDIAVTNCALSYKGAFWYKNCHRVNLMGRY
GDNSHSKGVNWFHWKGHEHSIEFAEMKLRPSNFRNLEGRRKRS
Download sequence
Identical sequences H3BY37
99883.ENSTNIP00000000902 ENSTNIP00000000902 ENSTNIP00000000902

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.