SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000005481 from Tetraodon nigroviridis 69_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000005481
Domain Number 1 Region: 84-162
Classification Level Classification E-value
Superfamily Thyroglobulin type-1 domain 9.16e-23
Family Thyroglobulin type-1 domain 0.00014
Further Details:      
 
Domain Number 2 Region: 1-40
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000000863
Family Growth factor receptor domain 0.00092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000005481   Gene: ENSTNIG00000002914   Transcript: ENSTNIT00000005628
Sequence length 166
Comment pep:novel chromosome:TETRAODON8:Un_random:27875736:27878983:-1 gene:ENSTNIG00000002914 transcript:ENSTNIT00000005628 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
QGEPCGVYTLSCASGLRCVPPPRDHSPLQALLQGRGFCAKYTRMVPTERPHPPGPHPSHS
SDIERQRHLHTCPEVMRSGAVLISSQAPCRKLLNSVLRGLELTIIQSDRDIYIPNCDTRG
FYRKKQCRSSKGMQRGHCWCVDELGSPVPSRARDDGTLPCDARSSP
Download sequence
Identical sequences H3CB59
ENSTNIP00000005481 ENSTNIP00000005481 99883.ENSTNIP00000005481

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]