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Domain assignment for ENSTNIP00000007700 from Tetraodon nigroviridis 69_8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000007700
Domain Number 1 Region: 77-117
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000209
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 2 Region: 511-557
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000183
Family TSP-1 type 1 repeat 0.001
Further Details:      
 
Domain Number 3 Region: 25-73
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000157
Family TSP-1 type 1 repeat 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000007700   Gene: ENSTNIG00000005034   Transcript: ENSTNIT00000007861
Sequence length 558
Comment pep:novel chromosome:TETRAODON8:Un_random:74030120:74033807:-1 gene:ENSTNIG00000005034 transcript:ENSTNIT00000007861 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GQGPAGPRYRRLTAVFVSGSCVQPVGCRWGPFADWSECDGCSKTEVRTRHVETFAQFGGD
PCSGEATQTQACVPTKSCPLEAGCGNRFRCTSGQCISPALVCNGDQDCEDGLDERGCSPD
GSRSSCDLDKTPPNSDLVGKGYDILTGDLRAGVINTVSFGGQCRKVFSGDHKILYRLPQN
ILRYNFEDQPSWSWRMKDIESVSVTVNDEESDESFESSWSYMQSIQSNALWGHDRRKFHK
TVTESRVRPGCPWRPSPVSLLNKVELAQFQNTAPEYLTLAEGFWRALSSLPTTYDYAAYR
QLFQTYGTHYFSEGSLGGEYQALLELTQHALATTSTTSREYERCWRKVKRRFLRKKPVTV
SRGRAGSDSLFTPWSPGTSMRNVPIKVDVVGGNPGLKRFLSILDLENPEENGRKYDDWAS
SVKDFPQIIEQKVRPLYELVKEVECAGLKKLHMKQALEEYLSAEHPCRCRPCHNNGRPLL
LGSQCVCVCRLGTSGAACQSGAAVGEQPGVIHGSWSCWSSWVSCAGGQRRRTRTCTHPAP
SKGGLHCVGPQEEQKQCE
Download sequence
Identical sequences H3CHH2
ENSTNIP00000007700 ENSTNIP00000007700 99883.ENSTNIP00000007700

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