SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000011494 from Tetraodon nigroviridis 69_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000011494
Domain Number 1 Region: 9-220
Classification Level Classification E-value
Superfamily L domain-like 2.01e-33
Family Ngr ectodomain-like 0.0021
Further Details:      
 
Domain Number 2 Region: 229-330
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000145
Family I set domains 0.024
Further Details:      
 
Domain Number 3 Region: 432-503
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000143
Family Fibronectin type III 0.0034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000011494   Gene: ENSTNIG00000008647   Transcript: ENSTNIT00000011676
Sequence length 629
Comment pep:novel chromosome:TETRAODON8:17:5865523:5868544:1 gene:ENSTNIG00000008647 transcript:ENSTNIT00000011676 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
SCPSQCSCFYHNLSDGSKARSVICNDPEISVVPVGFPADTSKLRIEKTAIQRIPSEAFNY
LSSLEFLWMSFNTLSALNPDSFRGLFNLEELRLDGNALTAFPWESLMDMPSLRLLDLHNN
QLTVLPAEATIFIRNLTYLDLSSNSLLTLPAEVLSTWLAAKPVQGPESSKMILGLHDNPW
VCDCRLYDLVQFQRFPTLSVAFIDTRLRCSAPESVSGVLFSDTELRQCQLPRIHTAVARV
RSAVGNNVLLRCGTIGVPIPDLTWRRADGRVVNGTATVQQETSKEGITWSILSVPAVSYR
DSGKYICKASNYAGNAEAVITLIISNAPKPEGNQTSNDKKAKAKKPNQMGKAAYQEKLVA
RYVVATSSPSSRPTLDPGFLTGLVTDAVSYSLADRATPTAATSNPEALLDLEKTNLSNLA
ANASSLQQDPDRVVRSVKVVGDTDNTISLNWRAPKAKNTTAFSVLYAVFGERDMRRINVG
AGQNRVTIEGLVPRTKYIACVCVRGLIPKKEQCVIFSTDEAASATGTQKLINVIVITVAC
IIAVPLTVIVCCGALKRRIKKYWGKKSKDIQDSYVTFETLSPGTKAKGLEGEYLNRLNPE
ESNRLLSARSSLDSEATAKIEGQPNEYFC
Download sequence
Identical sequences H3CTB0
ENSTNIP00000011494 ENSTNIP00000011494 99883.ENSTNIP00000011494

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]