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  Home > Genomes > Tetraodon nigroviridis 69_8 > ENSTNIP00000013392

Domain assignment for ENSTNIP00000013392 from Tetraodon nigroviridis 69_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000013392
Domain Number 1 Region: 1177-1404
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.3e-40
Family Laminin G-like module 0.0021
Further Details:      
 
Domain Number 2 Region: 224-336
Classification Level Classification E-value
Superfamily Cadherin-like 2.14e-30
Family Cadherin 0.00061
Further Details:      
 
Domain Number 3 Region: 639-751
Classification Level Classification E-value
Superfamily Cadherin-like 3.71e-27
Family Cadherin 0.00067
Further Details:      
 
Domain Number 4 Region: 530-637
Classification Level Classification E-value
Superfamily Cadherin-like 3.01e-26
Family Cadherin 0.0019
Further Details:      
 
Domain Number 5 Region: 329-428
Classification Level Classification E-value
Superfamily Cadherin-like 4e-26
Family Cadherin 0.00078
Further Details:      
 
Domain Number 6 Region: 116-222
Classification Level Classification E-value
Superfamily Cadherin-like 4.84e-26
Family Cadherin 0.0012
Further Details:      
 
Domain Number 7 Region: 1426-1617
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 6.33e-26
Family Laminin G-like module 0.017
Further Details:      
 
Domain Number 8 Region: 11-114
Classification Level Classification E-value
Superfamily Cadherin-like 1.27e-25
Family Cadherin 0.0024
Further Details:      
 
Domain Number 9 Region: 744-846
Classification Level Classification E-value
Superfamily Cadherin-like 2.28e-25
Family Cadherin 0.0013
Further Details:      
 
Domain Number 10 Region: 433-534
Classification Level Classification E-value
Superfamily Cadherin-like 2.14e-23
Family Cadherin 0.0013
Further Details:      
 
Domain Number 11 Region: 2219-2482
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 0.000000000000128
Family Rhodopsin-like 0.023
Further Details:      
 
Domain Number 12 Region: 1117-1156
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000967
Family EGF-type module 0.0068
Further Details:      
 
Domain Number 13 Region: 847-949
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000141
Family Cadherin 0.0097
Further Details:      
 
Domain Number 14 Region: 1757-1797
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000276
Family Laminin-type module 0.014
Further Details:      
 
Domain Number 15 Region: 1627-1662
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000393
Family EGF-type module 0.016
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000013392
Domain Number - Region: 1668-1703
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00028
Family EGF-type module 0.021
Further Details:      
 
Domain Number - Region: 1096-1121
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00329
Family EGF-type module 0.044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000013392   Gene: ENSTNIG00000010483   Transcript: ENSTNIT00000013586
Sequence length 2725
Comment pep:novel chromosome:TETRAODON8:19:5862324:5907933:-1 gene:ENSTNIG00000010483 transcript:ENSTNIT00000013586 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
QKRRKRQANTNPQFQLPNYQVSVPENEPKGTRVITVKATDPDDGEAGRLEYSMEAMLDSR
SNAFFEIDLRTGSITTSRPLDREFKDTHVFKVTVTDNGSPKRSATSYLTVTVSDTNDHSP
VFEQNEYRVSIRENVEVGFEVMTIRATDGDAPSNANMVYKIVNDDGVNSVFEIDSRNGLV
RIRERPDRETKDRYQLIVEANDQGKDPGPRSATATVNISVEDENDNYPQFSKKRYVVQVP
ENVAVNTKIIQVEATDQDEGNNAKVHYSIISGNIRGQFYIHSPTGVIDIINPLDYEMIRE
YSLRIKAQDGGRPPLINGTGMVVVQVVDVNDNTPMFVSTPFQATVLENVPVGYSVIHIQA
IDGDSGENARLEYRLIDTTPGFPFTINNSTGWITVSDELDRETMDFYTFGVEARDHGVPA
MSSSASVSTVLDVNDNVPTFTEKVYSLKINEDAIVGTSVLTVTAVDRDVNSVVTYQISSG
NTRNRFAITSQSGGGLITLALPLDYKQERQYVLTITASDGTRYDTAQVFINVTDANTHRP
VFQSANYQVTLSEDRPVGTTVMAISATDEDTGENARITYVMEDNVPQFKIDPDTGTITTQ
MEIDYEDQASFTLAIIAKDNGIPQKSDTAYVEIIILDANDNAPQFLRDMYQGTVLEDAPV
FTSVLQISASDRDSSTNGRVSYTFQGGDDGEGDFIIETYSGIIRIARKLDRENVPVYNLK
AFAVDRGVPPLKAAVPIHVVVQDINDNAPVFEKDVLFIDVEENSPVGSVVARITATDPDE
GSNAQIMYQIVEGNIPEVFQLDIFNGDLVSLTDLDYETRKEYTIVVQATSAPLVSRATVH
IRLVDCNDNPPVLQDFEIIFNNYITNKSNSFPAGIIGKVPARDPDVSDKLHYKFETGNEL
SLLLLNEDTGELRLSKDLDNNRPLEARMTVSVSDGLHHVTVVCTLRVTIITDDMLTNSIT
VRLENMSQERFLSPLLSLFLEGVAAVLSTRREGVFLFNIQNDTDVQGSILNVTFSAMQPG
GSQGKGTFFPSEELQEQIYLNRTLLRLISSQEVLPFDDNICLREPCENYMKCVSVLKFDS
SPPFISSETVLFRPIHPINGLRCRCPLGFTGDYCETEIDLCYSGPCKNNGRCRSREGGYT
CECMDDFTGENCEVNASSGRCIPGVCKNGGVCVNRLAGGFMCECPPGEYEKPYCEMTTRS
FPGQSFITFRGLRQRFHFTVSFMFATRERNALLLYNGRFNQKHDFIAVEIIDEQIQLTFS
GGETRTTVSPYVPGGVSDGQWHSIQLHYYNKPNMGRLGIPHGPSGEKVAVVAVDDCDISM
AVRFGKQIGNYSCAAQGTQTGQKKSLDLTGPLLLGGVPNLPEDFPVSNRDFVGCMKKLSI
DSKPIDMDSHIANNGTTPGCSAKKNFCVKQVCHNGGVCVSKWNTYICDCPTGYGGKNCEQ
VMPSPQFFNGQALVSWSDPDITVAVPWYMGLMFRTRQPAGTLMQANAGLSSTINLMVSEQ
QLRMEVMSRHQLVATLGFPQVRVDDGEWHHLLVELRSVKEGKDIKYMAAVSLDYDMYQKS
VEIGYDLPGLKLQTLYVGGLPAADNHVSKGFVGCIQGVRMGETSTNVANVNMAQGLKIRV
KDGCDVADPCDSNTCPENSHCSDDWSTHTCVCDPGYFGKECTDACQLNPCEHVSTCVRKP
SSSHGYTCECGQNYYGQYCENKVEKPCPHGWWGSPMCGPCSCDTSRGFHKDCNKTSGECR
CKDNHYRPEGEDVCYPCECFSLGSESRTCDAVTGQCPCKGGVIGRQCNRCDNPFAEVTST
GCEDTVVYEGCPKAFDAGIWWPKTRFGRPAATQCPKGSVGTAIRHCSDEKGWLQADLFNC
TTVTFTHLKKMNDELRRNISRMDSEHSKAAVRLLHSATTNMPHYFGNDVRTAAELLNHVL
QYESQQAGFELTAMKDSEFNENLVRAGSSLLDPSNKEHWDQIQRTEGGTAHLLRNFEDYA
NTLAQNVRKTYLKPFTIVTDNMILTVDYLDVTDPEKATLPRFEEISEVYPKELGSYVQFP
QFDLRPQGHKAHPAEPLPTPPTQTDSLQEEVTTVSDRRRRHLEPAAPLPVAVVIVYKSLG
KLLPERYDSDRRSLRLPNRPVINTAIVSTTVHSEGPPLPPVLDPPITLEYTLLETEERTK
PVCVFWNHSLAVGGTGGWSSKGCELLNRNNSHISCQCNHMTSFAVLMDISKREHGDVLPL
KIVTYTTVSVSLFLLLITLILLCLLRRLRSNLHAIHRNLVAALFFSELVFLLGINQTDNV
FVCTVIAILLHYFYMCTFAWMFVEGLHIYRMLTEMRNINHGHIRFYYAIGWGIPAIITGL
AVGLDPQGYGNPDFCWLSVHDTLIWSFAGPIFVVVLVNIVIFVLSAKASCSRRQKAMEKS
GAIPALRMAFLLLLVIGATWLLGLMAVNSNVMLFHYLFAVCSCLQGIFIFFFHVIFNKDV
RKNLKNVFTGKKMVSDESSTTRASLLTRTLNSNNAYEDGTIYRSGIGESTVSLDSTLREE
SGQKSKVSTATAKGHMDLDGPLFQRNSTKGRWFSDDSDSDSELSVDEHSSSYASSQSSDS
EDDDIDAKPKWNNERHPVHSTPKVVDSVSNHVKPYWPAEATTASDSEDLGGAERLRVETK
VNVELHQENKLNHTGERERETQPEREKPASGRDTAPPNQQNSHSNHQPEQRKGILKNKIN
YPPPLSDKNMKNRLREKLSDYNSPT
Download sequence
Identical sequences H3BYE3
99883.ENSTNIP00000001009 ENSTNIP00000001009 ENSTNIP00000013392

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.