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  Home > Genomes > Tetraodon nigroviridis 69_8 > ENSTNIP00000016750

Domain assignment for ENSTNIP00000016750 from Tetraodon nigroviridis 69_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000016750
Domain Number 1 Region: 811-859
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000725
Family Laminin-type module 0.0067
Further Details:      
 
Domain Number 2 Region: 857-909
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000114
Family Laminin-type module 0.0048
Further Details:      
 
Domain Number 3 Region: 328-380
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000446
Family Laminin-type module 0.027
Further Details:      
 
Domain Number 4 Region: 502-543
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000865
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 5 Region: 966-1013
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000109
Family Laminin-type module 0.0034
Further Details:      
 
Domain Number 6 Region: 918-968
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000237
Family Laminin-type module 0.054
Further Details:      
 
Domain Number 7 Region: 763-804
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000067
Family Laminin-type module 0.0092
Further Details:      
 
Domain Number 8 Region: 264-330
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000115
Family Laminin-type module 0.054
Further Details:      
 
Domain Number 9 Region: 450-494
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000014
Family Laminin-type module 0.013
Further Details:      
 
Domain Number 10 Region: 1075-1117
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000232
Family Laminin-type module 0.017
Further Details:      
 
Domain Number 11 Region: 391-442
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000335
Family Laminin-type module 0.027
Further Details:      
 
Domain Number 12 Region: 1123-1170
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000642
Family Laminin-type module 0.016
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000016750
Domain Number - Region: 1018-1072
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000237
Family Laminin-type module 0.0059
Further Details:      
 
Domain Number - Region: 1168-1298
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00417
Family Spectrin repeat 0.013
Further Details:      
 
Domain Number - Region: 1561-1761
Classification Level Classification E-value
Superfamily Tropomyosin 0.0085
Family Tropomyosin 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000016750   Gene: ENSTNIG00000013748   Transcript: ENSTNIT00000016964
Sequence length 1779
Comment pep:novel chromosome:TETRAODON8:13:12399636:12411053:1 gene:ENSTNIG00000013748 transcript:ENSTNIT00000016964 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
LSVLQVLTCVRESGAQSGLSLPELNDLCTEGSCYPATGDLLIGRAHQLSSTSTCGLSRPE
PFCIVSHLQEEKKCFVCDSSEAYEEQTEQVGMLVTTFAPNRLKTWQSENGMENVTVQLNL
EAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQIYRYFAYDCESSFPSVSHGPMKKVDD
VICDSRYSDIEPSTEGEVIFRVLDPAFHIDDPYSPRIQNMLKITNLRVKFTKLHTLGDNL
LDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPIEGAGQVREGMVHGHCMCNHNTKGL
NCEQCEDFHHDLPWRPAEGRNTNACKRCNCNQHSDSCHFDMAVYLASGNVSGGVCDSCLH
NTVGNQCEQCRPFYFQHPERDIRDPNICEACDCDPAGSLNGGICDRMTDVRAGLIAGQCR
CKANVEGERCDRCRDAHYGLGDHPEGCKACSCSPLGTLPGGNPCDSETGSCFCKRLVTGR
NCDQCVDEHWGLSNDMSGCRPCDCDLGGAINNQCDQVSGQCVCRDHMFGRRCDQVESGFY
FIGLDHYTYEAEDAKFGPGVTVVPRPHPHDRTPTWTGVGLANVPEGAFLEFSVDNIPFSM
EYDVLIRYEPQLPDQWEEVLMTVMRPGPIRADSRCINTVPDDDNQMISLHPSWRYVVLPR
PVCFESGLNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLDIFTSSEGGDSSGGSA
WETFQRYRCLENSQSVVKSPMADICRNYIFSISAMLHQGVKECQCDPQGALSTVCDASGG
QCQCRPNVVGRNCDRCAPATFQFGPNGCRACDCDPRGSLNSFCDQLTGQCLCLPGVSARQ
CDRCLPGHWGFPACHPCFCNGHAEECDALTGRCVDCRDHSAGHACERCLDGYYGDPVLGS
GDYCRPCMCPDGPGSLRQFAGSCYRGDGSQQATCICDTGYKGARCDECSPGYYGNPGEAG
GQCQPCRCNGNIDVLDPGSCDSRSGECLLCLHHSEGPACESCKLGYYGNATLSDCRRCVC
NALGSDPSACPAPNDCHCERSSGQCRCLPNVIGQHCNQCAANTWNMASGGGCEPCSCHPD
HSYGPSCNEISGQCSCRPGFGGRTCSECRELFWGNPEAECHACDCDPRGTAEPQCNKANG
RCVCVEGVSGPRCDVCARGYSGTFPDCQRCHQCFAEWDNVIGQLTNQTHRLVNKVNALKV
SGVSGPYRKTMESMEKSLADVRAVLNQNPAAQPLTEIQELLQQATDLMGALSQRLNQTEQ
TVLQVDDLDSTARAKLDSVVSDTQKLERTVQELLDQVEFMKNSDIRGASDSIKKYFLQSQ
AAEARANASTVEPGSPVETSSDLRRLTEDKMNQTGEEFLLEHTEHAQRLDDLAGELQTLD
LSEISHKVCGSRASGQDSCSSSPCGGLGCVDPEGQPKCGGEGCDGVVTKAGSSLRKAQDT
EQEITNAMEEVEKLSKMVSEAKVKADEARQSAQDVLMKTNRTKQRVDESNEELRTLIKQI
RDFLTQDAADLESVELVANEVLAMQMPTTPAQLQNLTNEIRQKVDELGDVAAILQQSAGD
IQEAERLLEQARRANEEATGVRDSAQKVKEALQEARKAQTAASSAIQQASADIQSTNSLL
SSVESETADAELKLNNATQRLQQLEQDVMQLRDQAQNVSQSKEQTDRDADSIRKIAEEVK
KELDTEIKDKYATVEQLISTKAVGVADAKKRAQLLQQEAKELLLKASEKLQQLKDVEKSY
EDNQRTLEKKAEQLVELEAAVRGLLTEISHKVTVYSTCV
Download sequence
Identical sequences H3D8A9
99883.ENSTNIP00000016750 ENSTNIP00000016750 ENSTNIP00000016750

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.