SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000017535 from Tetraodon nigroviridis 69_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000017535
Domain Number 1 Region: 26-146
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000137
Family V set domains (antibody variable domain-like) 0.039
Further Details:      
 
Domain Number 2 Region: 151-250
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000103
Family I set domains 0.054
Further Details:      
 
Domain Number 3 Region: 288-379
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000477
Family V set domains (antibody variable domain-like) 0.046
Further Details:      
 
Domain Number 4 Region: 694-804
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000561
Family V set domains (antibody variable domain-like) 0.048
Further Details:      
 
Domain Number 5 Region: 435-549
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000186
Family V set domains (antibody variable domain-like) 0.017
Further Details:      
 
Domain Number 6 Region: 570-667
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000808
Family V set domains (antibody variable domain-like) 0.043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000017535   Gene: ENSTNIG00000014512   Transcript: ENSTNIT00000017755
Sequence length 880
Comment pep:novel chromosome:TETRAODON8:3:6558705:6590791:-1 gene:ENSTNIG00000014512 transcript:ENSTNIT00000017755 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LGSDLTRPLHCPFLLRTSAGGCWARVVTVSPGPLIRVEGQPVSIRCDVKDYGGPREQDFE
WMMSRDTSGPRIKIISTFDAAYSHPSFSKRVASGDISVVRLDDNEVELKIAEVKALDAGL
YWCQTPSTDSVISGNYEARVQLIVIPNTLKVSPQTPPPVILEGSDLTLSCNVTRELTQPT
YLSVTWSVKRGATSEEILVFGPQGDVTVGPKFARRFADGGIRLVPGRNGLFELVISRVTS
SDEGIYECNGTEWTHESGGRWIKIVESFKEMGTVAVTPTGQSLSVKASLVLSPGNTLALI
CSVSAENLLSLALEVSWLADGRDIITMERSGVVISNTSLGGGQGKRGDANLEKAGSGEYR
LLVRGVSGEDGGSYACRVRAFIEKGKSAGGGGRWHMATEKTSSPLLVKVEQTKPNFTLVL
ESIVSPQMTLEHAELACRVTNITHLPPEGRLGVDWEHSALSGTGSESQTIGSLDGQGNLL
PGSLYSDRLKSGVISLTRTQPNTFKLQFLHTQEVDMGLYTCSVSVWSVNNQGNLVKVSEQ
QSSPLTVRWAPKRPSLKVMAKHIREASVGGATFEMSCVVSPENLGDVGYSVLIQSQESPG
SNVRTIMTLSPDSVLQHGGATDPNRRDNLVLTKSSAAEFRFRLSGVQLSDRGYYWCDITA
WTKQQPGQAWTKVTSAESNKIRIDFQENGPSFSIAIQSDASTVYPWETAKLECSLSGSGS
SPKTDDLAYEVRWFFTRLRGGETTTQVASIDRFGVVKKEVRNSSSDMSVERKDANAYVLS
VHGTQDRTADEYHCVTTPWYLSASTGAWTEGAELSSSRIFLTVRFAVWESLQLPLLYGVS
ASIGVGLFSLVFGLVCAHCCCRNTAHTPRSRNKLMDLEMD
Download sequence
Identical sequences H3C1N4
ENSTNIP00000017535 ENSTNIP00000002150 99883.ENSTNIP00000002150

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]