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  Home > Genomes > Tetraodon nigroviridis 69_8 > ENSTNIP00000017680

Domain assignment for ENSTNIP00000017680 from Tetraodon nigroviridis 69_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000017680
Domain Number 1 Region: 1200-1427
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.75e-40
Family Laminin G-like module 0.0024
Further Details:      
 
Domain Number 2 Region: 107-234
Classification Level Classification E-value
Superfamily Cadherin-like 2.57e-31
Family Cadherin 0.00064
Further Details:      
 
Domain Number 3 Region: 221-333
Classification Level Classification E-value
Superfamily Cadherin-like 2.86e-30
Family Cadherin 0.0006
Further Details:      
 
Domain Number 4 Region: 637-749
Classification Level Classification E-value
Superfamily Cadherin-like 4.28e-28
Family Cadherin 0.0007
Further Details:      
 
Domain Number 5 Region: 326-431
Classification Level Classification E-value
Superfamily Cadherin-like 7.42e-28
Family Cadherin 0.00054
Further Details:      
 
Domain Number 6 Region: 1442-1651
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.82e-26
Family Laminin G-like module 0.0061
Further Details:      
 
Domain Number 7 Region: 528-632
Classification Level Classification E-value
Superfamily Cadherin-like 9.28e-25
Family Cadherin 0.0014
Further Details:      
 
Domain Number 8 Region: 737-857
Classification Level Classification E-value
Superfamily Cadherin-like 1.23e-24
Family Cadherin 0.0015
Further Details:      
 
Domain Number 9 Region: 431-532
Classification Level Classification E-value
Superfamily Cadherin-like 5.42e-23
Family Cadherin 0.0008
Further Details:      
 
Domain Number 10 Region: 9-111
Classification Level Classification E-value
Superfamily Cadherin-like 4e-22
Family Cadherin 0.0017
Further Details:      
 
Domain Number 11 Region: 845-951
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000899
Family Cadherin 0.012
Further Details:      
 
Domain Number 12 Region: 1140-1178
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000191
Family EGF-type module 0.019
Further Details:      
 
Domain Number 13 Region: 1774-1814
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000406
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 14 Region: 1644-1678
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000443
Family EGF-type module 0.0076
Further Details:      
 
Domain Number 15 Region: 1684-1719
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000102
Family EGF-type module 0.027
Further Details:      
 
Domain Number 16 Region: 2269-2484
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 0.000022
Family Rhodopsin-like 0.02
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000017680
Domain Number - Region: 1120-1144
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00613
Family EGF-type module 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000017680   Gene: ENSTNIG00000014652   Transcript: ENSTNIT00000017903
Sequence length 2743
Comment pep:novel chromosome:TETRAODON8:11:6687045:6716431:1 gene:ENSTNIG00000014652 transcript:ENSTNIT00000017903 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
RRRRSINSSPQFQPPMYQVSVAENKPAGTAVALKAVDADEGEAGRLEYFIEALFDSRSNS
LFAVDPANGAVSTVEVLDRETKDTHVFRVTAVDHGAPRRTAMATLTITVSDTNDHNPVFE
QQDYKENIRENLEIGYEVLTVRATDGDAPVNGNILYRIINGNGSNDVFEIDSRSGVIRTR
GLVDREQVEAYMLLVEANDQGRDPGPRSATATVHIVVEDDNDNAPQFSEKRYVVQVPEDM
APNTEILQVTATDEDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSHLDYEANKEYTL
RIRAQDGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVLENVPLGYSIIHIQAVDA
DSGDNSRLEYRLTSTTPNFPFAINNSTGWIVVAAELDRESVDFYNFGVEARDQGYPVMSS
SASISMTVLDVNDNNPEFTQKAYYMRLNEDAAVGTSVLTVSAVDQDINSVVTYQISSGNT
RNRFSITSQSGGGLITLALPLDYKLERQYVLTITASDGTLFDTAKVFVNVTDANTHRPVF
QSSHYTVNINEDRPMGTTVVLISATDEDTGENARITYFMDDSIPQFDIDPDSGAVTTQME
LDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNGPRFLRDHYVGSVMEDVPVFT
SVVQVSATDRDSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDRENVPVYNLQAF
AVDKGVPALKTPVNIHVTILDVNDNPPVFEKDELDIMVEENSPIGLVVGHVSATDPDEGS
NAQIMYQIVEGNIPEVFQLDIFSGELTSLIDLDYETRNEYVIVVQATSAPLVSRATVHIK
LVDKNDNVPVLKNFQIIFNNYVTNKYSSFPSGVIGRIPAHDPDVSDQLHYSFEVGNELNL
VLLNQSTGEIQLSQALDNNRPLEASMRISVSASADGVHAVSAQCLLQVTIITDEMLSNSI
TLRLANTSQEQFLSLLLAQFLDGVARVLSASRQDVVIFNIQDDTDVSARILNVSLSVAVP
VFAQARQQPRGLGRGATDRPGAGAESAGGDFFGSEELQERLYLNRSLLAKISSQEVLPFD
DNICLREPCENYMKCVSVLKFDSLRAVSSTSDTMFRPIHPIAGLRCRCPTGFTGDYCETE
IDLCYSKPCGAHGVCRSREGGYTCECLEDYTGEHCQLSSRSGRCAPGVCRNGGTCVNLLV
GGFKCECPSGGYEKPYCEMTTRNFPPHSFLTFKGLRQRFHFTLSLTFATREPNGLLLYNG
RFNEKHDFIAMEIIDEQIQLTYSAGETKTTVAPRIPGGVSDGQWHVVEVHYYNKPILNQA
GLPQGPSDQKVVVVTVDNCDTSVALRFGHVIGNYTCSARGSQSGSKKSLDLTGPLLLGGV
PKLPEDFPVRNRQFMGCIRNLRVDNQHVDMASFIANNGTLPGCSAKRHFCNTNPCLNGGT
CVNLWGSFSCDCPLGFGGKSCERVMASPQRFLGNSLLQWNNMAAVASSVPWHVELMLRTR
QASAILLHISSGLQHNLTLQLRDGSVLMGLHQGENSTLSRLEEVLVNDGEWHHLQLDISS
LGRPLSHHKAVLSLDQGLYLASMEVDGKLRESKLKTVSVGGLAAPGGKILQGFRGCIQGL
RIGGALSLSQARKVNVEPGCSVPDPCSSNPCPANSYCRDDWDSHSCTCLTGFYGNNCTDA
CSLNPCEHESVCTRRLSSSRGYTCDCSRNYFGHYCEKNRTDLPCPRGQWGHKTCGPCNCQ
TDKGFDFDCNKTSGECRCKDNHYRPEGSGGCLLCDCYPLGSFSRACDRDSGQCQCKPGVI
GRQCDRCDNPFAEVSANGCEVIYDSCPQAIEAGIWWPRTKFGLPAAVSCPRGTLGTAIRH
CDEHKGWLPPSLFNCTSSTFSRLQTLAEKFSHNASLLDAGHVRQTAAMLANATLHTETFY
GSDVKVVYRLVRSLLQHESHQQGFNLTATQDVHFTENLVRVSSAVLSPDTRPHWELIQHS
EGGTAALLRCFEEYTNTLAQNMRKTYLSPFTIVTPHIVISVDRLKKLGFAGARLPRFQAL
RGPRPADLETTVTLPDSVFQPPVDTKGHRHLDVFPEPSSRNRSTVRKRRHPEDEQQDAVA
SVMIFYSLASLLPESYDSDKRSLRVPKRPVINTPVVSIAVHDNDKLLQHNLDKPISVQFR
LVATEERSKPICVLWNHTILSGGRGGWSAKGCEVVFRNSSHISCQCYHMTSFAVLMDVSR
RENGEILPIKVLTWSTVGVTLGFLLLTTVFLLCLRAMKCNKTSIINNGATALFLSELIFI
LGINQADNPFLCTIVAILLHFFYLCTFSWLFLEGLHIYRMISEVRDINYGPMRFYYLIGW
GVPAFITGLAVGLDPEGYGNPDFCWLSVHDTLIWSLAGPVAVAVSVNVLLYALSSRASCS
PHHHSLEKKEPRVSGLKTAGGVLLLVSLTCFLALLSVNSDVILFHYLFAGFNCLQGPFVF
FFRVVFNKEARSAMKYCCGRRRPDHMTKPKAAGSKCRRTCAEGQLYHLPFGGSSASLNGT
LRSGKSQQSYLPFLLRDEALSSSQAHIALNDHASLFHQTEEQPDESDSDSDLSLEDDQSG
SYASTHSSDSEDEEGPLPPEECWENLAANADSRMLRPAGEESEDGEAAAPDGPRPDVPNH
PDSGLGPNASAFPDSRTQDSLTGVPSHSAPPHRGILKKKQLSPIAERNCPSRPADAPASP
RGSSSSGGRAKAEQLNGVALTIKAGTVDGDSSGSEFLFFNFIP
Download sequence
Identical sequences H3DAY8
ENSTNIP00000017680 99883.ENSTNIP00000017680 ENSTNIP00000017680

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.