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  Home > Genomes > Tetraodon nigroviridis 69_8 > ENSTNIP00000018108

Domain assignment for ENSTNIP00000018108 from Tetraodon nigroviridis 69_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000018108
Domain Number 1 Region: 3020-3278
Classification Level Classification E-value
Superfamily YWTD domain 2.35e-56
Family YWTD domain 0.00000225
Further Details:      
 
Domain Number 2 Region: 1267-1532
Classification Level Classification E-value
Superfamily YWTD domain 1.31e-53
Family YWTD domain 0.00000197
Further Details:      
 
Domain Number 3 Region: 1884-2141
Classification Level Classification E-value
Superfamily YWTD domain 3.27e-45
Family YWTD domain 0.0000154
Further Details:      
 
Domain Number 4 Region: 3866-4148
Classification Level Classification E-value
Superfamily YWTD domain 5.49e-45
Family YWTD domain 0.00000725
Further Details:      
 
Domain Number 5 Region: 1578-1834
Classification Level Classification E-value
Superfamily YWTD domain 6.8e-43
Family YWTD domain 0.0000317
Further Details:      
 
Domain Number 6 Region: 535-792
Classification Level Classification E-value
Superfamily YWTD domain 2.09e-40
Family YWTD domain 0.00000706
Further Details:      
 
Domain Number 7 Region: 202-472
Classification Level Classification E-value
Superfamily YWTD domain 6.28e-39
Family YWTD domain 0.0000896
Further Details:      
 
Domain Number 8 Region: 2192-2463
Classification Level Classification E-value
Superfamily YWTD domain 1.09e-35
Family YWTD domain 0.0000305
Further Details:      
 
Domain Number 9 Region: 2926-3012,3271-3332
Classification Level Classification E-value
Superfamily Growth factor receptor domain 8.95e-24
Family Growth factor receptor domain 0.018
Further Details:      
 
Domain Number 10 Region: 111-191,468-523
Classification Level Classification E-value
Superfamily Growth factor receptor domain 4.24e-19
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 11 Region: 3769-3863,4149-4187
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000314
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 12 Region: 1171-1259,1533-1573
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000565
Family Growth factor receptor domain 0.018
Further Details:      
 
Domain Number 13 Region: 848-888
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000183
Family LDL receptor-like module 0.00013
Further Details:      
 
Domain Number 14 Region: 3561-3600
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000209
Family LDL receptor-like module 0.00057
Further Details:      
 
Domain Number 15 Region: 3603-3638
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000236
Family LDL receptor-like module 0.0005
Further Details:      
 
Domain Number 16 Region: 3360-3404
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000314
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 17 Region: 3645-3689
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000034
Family LDL receptor-like module 0.00097
Further Details:      
 
Domain Number 18 Region: 888-930
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000038
Family LDL receptor-like module 0.00072
Further Details:      
 
Domain Number 19 Region: 2684-2720
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000497
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 20 Region: 3522-3561
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000511
Family LDL receptor-like module 0.00083
Further Details:      
 
Domain Number 21 Region: 973-1011
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000602
Family LDL receptor-like module 0.00096
Further Details:      
 
Domain Number 22 Region: 929-968
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000785
Family LDL receptor-like module 0.00089
Further Details:      
 
Domain Number 23 Region: 3478-3519
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000118
Family LDL receptor-like module 0.00077
Further Details:      
 
Domain Number 24 Region: 1013-1051
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000131
Family LDL receptor-like module 0.0001
Further Details:      
 
Domain Number 25 Region: 2549-2590
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000017
Family LDL receptor-like module 0.0018
Further Details:      
 
Domain Number 26 Region: 25-64
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000196
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 27 Region: 2589-2629
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000249
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 28 Region: 2723-2757
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000275
Family LDL receptor-like module 0.00076
Further Details:      
 
Domain Number 29 Region: 2763-2797
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000034
Family LDL receptor-like module 0.00085
Further Details:      
 
Domain Number 30 Region: 1061-1105
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000537
Family LDL receptor-like module 0.00023
Further Details:      
 
Domain Number 31 Region: 3442-3477
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000055
Family LDL receptor-like module 0.00091
Further Details:      
 
Domain Number 32 Region: 2895-2936
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000641
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 33 Region: 2845-2884
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000144
Family LDL receptor-like module 0.00063
Further Details:      
 
Domain Number 34 Region: 3322-3356
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000017
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 35 Region: 3402-3440
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000183
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 36 Region: 2808-2843
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000301
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 37 Region: 1838-1887
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000101
Family EGF-type module 0.017
Further Details:      
 
Domain Number 38 Region: 3690-3724
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000144
Family LDL receptor-like module 0.0023
Further Details:      
 
Domain Number 39 Region: 3730-3769
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000314
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 40 Region: 74-109
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000615
Family LDL receptor-like module 0.0029
Further Details:      
 
Domain Number 41 Region: 1104-1139
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000668
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 42 Region: 1142-1180
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000772
Family LDL receptor-like module 0.0021
Further Details:      
 
Domain Number 43 Region: 2146-2188,2453-2535
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000108
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 44 Region: 2647-2679
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000034
Family LDL receptor-like module 0.0019
Further Details:      
 
Domain Number 45 Region: 4201-4236
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000027
Family EGF-type module 0.029
Further Details:      
 
Domain Number 46 Region: 806-851
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000798
Family EGF-type module 0.026
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000018108
Domain Number - Region: 4274-4310
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000132
Family EGF-type module 0.024
Further Details:      
 
Domain Number - Region: 4239-4273
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000212
Family EGF-type module 0.017
Further Details:      
 
Domain Number - Region: 4371-4413
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000335
Family Integrin beta EGF-like domains 0.054
Further Details:      
 
Domain Number - Region: 4311-4344
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00779
Family EGF-type module 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000018108   Gene: ENSTNIG00000015058   Transcript: ENSTNIT00000018332
Sequence length 4549
Comment pep:novel chromosome:TETRAODON8:9:4018179:4064858:-1 gene:ENSTNIG00000015058 transcript:ENSTNIT00000018332 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
LRPELLLAAVSHGSHAPKADDHPKTCSSKQFVCKDQVTCISKGWRCDGEKDCPDGSDESP
DICKPRRSHSKVNQCPVNEHGCLDPEVCIPMSRLCDGVPDCTDGWDEGPHCREQAPACIA
QRCQFNCSVTHDGPRCYCSAGYEVTADGRTCKDFNECNVYGTCSQTCSNTEGSYTCSCVE
GYLLQPDNRSCKAKNDPVDRLPMLLIANLHDIRCTTLSGALSRLHAITTKQTMAMDFIYA
DETVCWIDVGETPAATHLKCASIPDLKTVTNIRTINITLSLHHVEQMAIDWLTKNFYFVD
DVDDRVFVCNKDGQTCVTLLDQDLYNPKGIALDPAMGKVFFTDYGSTPRVERCDMDGQNR
TKLVDTKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTIIQGLLIEHLYGLTV
FENYLYATNSDEGNLNPKTSVIRVNRFNSSDFQVVTRVDRGAALHVYHQRRQPQVRSHAC
TTDQFGKAGGCSDICLLSNSHKTRTCRCRSGFSLGSDGKSCKKPDHELFLVYGKGRPGII
RGMDMNAKVPDEYMIPIENLMNPRALDFHAASEYIYFADATSYIIGRQKIDGTERDTILK
EGIHTVEGIAVDWMGGNLYWTDDGPKKTISVARLEKASQTRKTLIEGKMSHPRAIVVDPQ
HGWMYWTDWEEDPSESNRGKIKKAWMDGSHHQIFLTSKTVLWPNGLSLDIPQGILYWVDA
YYDRIEMVYLNTTERKVVYEGQELTHAFGLCHYKQFLFWNEYRGGSIYKLDQVTKTVTLL
RNERPPIFEIRVYDAHQQQGLGSNACRVNNGGCSSLCLAIPDGRSCGCADDQILDGDNVT
CKANPSYVNPPQCQPGEFACKNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPADRFK
CQNNRCIPLRWLCDGDNDCGNDEDESNTTCSARTCPPNQYPCASGRCIPISWTCDLDDDC
GDRSDEPDSCAYPTCFPLTQFTCANGRCININWRCDNDNDCGDNSDEAGCSHSCSSVQFK
CNSGRCIPEYWTCDGDNDCGDYSDETHANCTNQATRPPGGCHVDEFQCRMDSLCIPMRWR
CDGDTDCMDLSDERNCEGVTHMCDPAVKFSCKDSARCISKAWVCDGDSDCEDNSDEDNCD
ALVCKLSHHTCATNDSICLPAEKLCDGTDDCPDGSDEKLCDLCALDNGGCSHNCTIIPGE
GFMCSCPLGMELGADNKTCQIQSFCAKHLKCSQKCEQEKSSVKCSCYEGWELEADMESCK
STDPFKPFIIFSNRHEIRRIDLHKGEFSVLVPGLRNTIALDFHLSESTLYWTDVVEDKIY
RGKLSENGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLL
AGEVEHPRAIALDPRDGILFWTDWDASLPRIEAASMSGEGRRTIHRETGSGGWPNGLTVD
YMERRIVWIDARSDAIYSAMYDGSGLIEVLRGHEYLSHPFAVTMYGGEVYWTDWRTNTLA
KANKWTGHNVTVVQRTNTQPFDLQVYHPSRQPKAPNPCASSPCSHLCLINFNQTFSCACP
HLMKLQPDKRTCKESRKFLLYARQIEIRGVDIDNPYYNYIISFTVPDIDNVTAVDYDAVE
HRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAHGLAVDWVSRNLFWTSYDANKKQINV
ARLDGSFKNAVIQGLDKPHCLVLHPILGKLYWTDGDNISMANMDGSNHTTLFTGQKGPVG
LSIDYEKDQLYWISSGNGTISRCQLDGTKLEIMEGVKGKLSKATALAIMGDKLWWADQGS
DQIGTCDKKDGGNWKVMRNNTSPMMHMRIYDESAQKSGINLCSNNNGDCSQLCLPTSPTT
RACMCTAGYSLKSGQQSCEGMGSFLLFSVHEGIRGIPLDPADKSDALVPVSGTSLAVGID
FHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGITVDWIAGNIYWTDQGFDV
IEVARLNGSFRYVVISQGLDKPRAITVHPSKGYLFWTEWGQYPRIERSRLDGSQRLVLVN
VSISWPNGISIDYEEGLLYWCDARTDKIERINLETGENRELVLANNNMDMFAVSVFEEHI
YWSDRTHANGSIKRGSKDNATDAVQLRTGIGVQLKDIKVFNKARQQGTNVCRNNNGGCEQ
LCLYRGNGERTCACAHGMLAEDNRSCRDYDGYLLYSERTILKSIHLSDETNLNAPIKPFE
DPDHMKNVIALSFDYHGGGGKGSNRIFFSDIHFGNIQQINDDGTDRKIVVDNVGSVEGLA
YHRGWDTLYWTSYTTSTITRHTVDQSRTVAYNRDTVVNMSAEDHPRAFVLDECQDLMFWT
NWNEQAPSIMRASLNGANVLVIIGSDIKTPNGLAIDHRAEKLYFSDATLDKIERCEYDGS
SRYVLLKNEPVHPFGLAVYGDYIFWTDWVRRAVLRADKYTGGDMKVLRADIPQQPMGIVA
VNDTNNCEFSPCRTNNGGCQDLCLPTSDGRVNCSCRGDRHLLEDNTCSPLNMSCGSVDGF
ECGNGDCINYSLTCDGMAHCKDKSDEKQSYCANRICKKGYRRCINGRCIGHQFWCDGTDD
CGDHSDELPCNMTLCKPGEFQCKDGSCISNFSRCDQVVNCEDASDEMNCQSTDCSRFFRL
GVKGASFQSCERTTLCYLSSWVCDGNNDCGDFSDEKNCPDKRKLKCPVNFFACPSGRCIP
MSWTCDKENDCENGADETHCDKFCTSTQFECANHRCISSHWVCDGSDDCGDGSDEDQKCK
SKTCSPEAFQCPGSHMCVPQRWKCDGDKDCPDGADESVKAGCMYTNSTCDPENEFMCQNR
QCIPKHFVCDLDVDCSDGSDESPECEYPTCGPDEFRCANGRCLNQKKWECDGEFDCHDHS
DEAPKNPRCTSSERTCNDSAFTCLNGNCLNETLLCDRNDDCGDGSDELNCFINECLNSKL
SGCSQLCDDLKIGYKCRCHPGFQLKRDGKTCVDVDECLTTYPCSQRCINTHGSFHCLCVD
GFQPSPNDPNICLASVEEEPYLIFANRYYLRKLNLDGSNYTLIKQGLNNAVALDFHYAEQ
MIYWTDVTTQGSMIRRMHMNGSNMEVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVS
KLNGAYRTVLVNSGLREPRALAVDVRYRYLYWSDWGDNPHIGRIGMDGSNRSVIVEEKIT
WPNGLTLDFINDRIYWADAREDYIEFASLDGTNRHTVLNHDIPHIFAMTLFEEYIYWTDW
ETKSINRAHKTQGTNKTTLISTLHRPMDVHIYHPYRQPEVLNHPCQTNNGGCSNLCLLSP
GGGYKCACPTNFYLASDQRTCMSNCTASQFVCKNDKCIPFWWKCDTEDDCGDRSDEPADC
PEFKCRPGQFQCGTGICTNPAYICDGDNDCQDNSDEANCDIHVCLPSQFKCSHPSRCIPG
IFRCNGQDNCGDGEDEKDCPEVTCAPTQFQCAITKRCIPRVWVCDRDNDCVDGSDEPANC
TQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDASDEPKEECAERTCEPYQFRCKNNRCV
PGRWQCDYDNDCGDNSDEDKCMPRQCSESEFACTNGRCIAGRWKCDGDHDCADGSDEHGC
DLKCDTDHFQCNNGHCIPIRWRCDADPDCLDGSDEENCGSATERHCPADEFQCNNTLCKP
LAWKCDGEDDCGDNSDENPEQCRKFQCPPTRAFRCQNDRVCLQVSKRCDGVNNCGDNSDE
LNCPTETPPAVPTCEKDEFLCANHRCISSTLRCNLFNDCEDFGSDEIGCKTDTKLNDCRS
NRTHCGDGDEAHCVTNGTDSFCSCKPGFQKIGHRTCGDKNECLQFGVCSHSCNNTKGSYK
CSCHKYFTRISDTCKADNINSSRQILYIADDNEIRSLDPGMPDWRYEQTFQGDASVRIDA
MDVHVKTNRIFWTNWHTGRISTYELQGPSLSATSSNSHRHRRQSEGRVTDLQIKELKMPR
GIAVDWVAGNLYWTDSGRDVIEVAQMSGQNCKTLISGMIDEPYAIVVNPQRGTMYWADWG
NHPKIETAAMDGTLRQTLVHENIQWPTGLAVDYFNERLYWADAKLSVIGSVRLDGSDPVI
SVSGLKNSCPDLLHPFSIDIFEDYIYGVTYINNIVFRVNKFGKGKMENLTTGINHASDIV
LHHRYKQPEMTNPCDRKKCEWLCLLSPSGPVCTCPNKYVADNGTCVEKPVPTQSPFSPPS
EPCDIQCLNGGSCFLNARQVAKCRCQPSYIGERCEINQCRDYCKNGGTCTASHAGVPTCR
CPKGFTGPTCSRQTCQDYCQNGGSCSVSMGNQPTCSCPSEYQGDRCQYTTCEGFCHNSGT
CLQTSNGTKLCLCSNQYVGHQCELDKCQFCGTGKCFTSPSSEVTCSCPNGQIQPSCFTCL
NYCSRGQCSVDSRTLLPQCKCPAGWSGYTCEIAAAPVDSSASGGSTASIVVPVLLLLLLA
LLAVGAVLWYRRRMRGAKGFQHHRMTNGAMNVEIGNPAYKIYEGDPDDDAGELLDSDFAL
DPDKPTNFTNPVYATLYMGAHNSRNSLASTDEKKELLSQADEDLSDPLA
Download sequence
Identical sequences H3DC65
ENSTNIP00000018108 ENSTNIP00000018108 99883.ENSTNIP00000018108

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.