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  Home > Genomes > Tetraodon nigroviridis 69_8 > ENSTNIP00000019679

Domain assignment for ENSTNIP00000019679 from Tetraodon nigroviridis 69_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000019679
Domain Number 1 Region: 888-1004
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000001
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 2 Region: 257-388
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000157
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 3 Region: 383-426
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000000419
Family EGF-type module 0.0036
Further Details:      
 
Domain Number 4 Region: 847-888
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000000466
Family EGF-type module 0.005
Further Details:      
 
Domain Number 5 Region: 616-658
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000339
Family EGF-type module 0.0049
Further Details:      
 
Domain Number 6 Region: 1118-1160
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000449
Family EGF-type module 0.0086
Further Details:      
 
Domain Number 7 Region: 578-620
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000558
Family EGF-type module 0.0048
Further Details:      
 
Domain Number 8 Region: 987-1096
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000173
Family Growth factor receptor domain 0.014
Further Details:      
 
Domain Number 9 Region: 756-889
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000455
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 10 Region: 229-271
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000903
Family EGF-type module 0.0075
Further Details:      
 
Domain Number 11 Region: 654-698
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000354
Family EGF-type module 0.0051
Further Details:      
 
Domain Number 12 Region: 116-159
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000607
Family EGF-type module 0.016
Further Details:      
 
Domain Number 13 Region: 540-582
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000661
Family EGF-type module 0.0068
Further Details:      
 
Domain Number 14 Region: 154-198
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000754
Family EGF-type module 0.0069
Further Details:      
 
Domain Number 15 Region: 193-236
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000115
Family EGF-type module 0.0088
Further Details:      
 
Domain Number 16 Region: 691-733
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000636
Family EGF-type module 0.011
Further Details:      
 
Domain Number 17 Region: 499-541
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000013
Family EGF-type module 0.015
Further Details:      
 
Domain Number 18 Region: 70-107
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000154
Family EGF-type module 0.019
Further Details:      
 
Domain Number 19 Region: 418-454
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000161
Family EGF-type module 0.0075
Further Details:      
 
Domain Number 20 Region: 34-76
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000159
Family EGF-type module 0.012
Further Details:      
 
Domain Number 21 Region: 1086-1120
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000255
Family EGF-type module 0.0096
Further Details:      
 
Domain Number 22 Region: 459-502
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000274
Family EGF-type module 0.01
Further Details:      
 
Domain Number 23 Region: 1-30
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000214
Family EGF-type module 0.03
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000019679
Domain Number - Region: 1152-1188
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000214
Family EGF-type module 0.015
Further Details:      
 
Domain Number - Region: 730-762
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000745
Family EGF-type module 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000019679   Gene: ENSTNIG00000016579   Transcript: ENSTNIT00000019909
Sequence length 1205
Comment pep:novel chromosome:TETRAODON8:17:4217248:4262897:1 gene:ENSTNIG00000016579 transcript:ENSTNIT00000019909 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
PCRNSGICSEGPAGFVCYCPDGFAGVRCHQKESVCSLAPCLNNATCVSKGNESVCRCLRG
FSGKNCEEIIDYCRLLNINCLNEGLCLSVIGGYQCVCSPGWTGEFCQYVGDACLVQPNSC
VNGATCVTTSQPSSPPQYSCKCPLGFTGEYCEAEINECGSFPCQHNGTCVDLLGHYTCRC
PAVGFVGQNCEIDVDACALAPCDNGGRCVLNNASSYTCVCAPGWSGQTCRLNVNDCVQHW
CRNGATCVDEIDGYSCICPGGFTGIYCEQDIDYCVDHHCSQHGVCLDQQNNYTCLCLPGF
EGPLCQLETNECNSVPCAHGATCVDLIRDYRCQCPPGFEVFLCPAGRTCSENPCLNGGSC
VDLINGYICTCPFGFGGAFCELDLDECQSKPCQNGGICADGINLYECFCADGFVGSSCEI
NYDECVHGYCANNSTCLDLVADYECVCLPGFAGYRGADCSSPLNLCKSNPCKPEGTLHCE
ELANTYRCVCQHGHTGPRCQTPIKHCVDGLCQHGSTCEDLSGGFKCHCSAGLKGQFCEIN
VDECEEKPCGILSVCQDALNGYSCFCAPGFIGKNCETEVNECLSQPCGNGGSCVDELNSY
SCQCLPGLTGAHCELNVDECASSPCLHNATCVDSVHGYNCVCVTGFAGSSCELDIDECSS
SPCKNGATCLDQPGPNCFRCHCRRGFTGPRCEINVDECSSSPCFHGFCYDVVDGFYCLCS
PGYAGLTCEQDLDDCINSSCSANSVCRDLHLSYECVCHPGWEGEFCQQETDECLSHPCKN
NATCADLLDGYKCFCSPGWTGVDCGEDVNECDSGPCLNGARCQESDVPGEFSCTCPPCFE
GSRCESDADECASDPCQNGGECADQINSYSCDCKAGFSGPRCEEDIDECAPNPCHNAAVC
QDLVNQFRCICPPGYFGTLCDLDVNECEDSPCLHEGICINTRGGFGCVCRPGYSGPQCNI
DIDECMSDPCHNSGKCIDGTDRFLCLCPAGFAGLRCETNVDECMSTPCLHGSCEDGIFSY
SCLCQAGWTGSRCETNIDDCAAIPCLNGGTCVDLIDKYACFCKDGYTGKTCQDDIDVCSA
AAFSVSLCFNGATCVDGEGSDFTCSCPAGFVGDFCEVDVNECCSAPCHNGAMCQDLINSY
VCHCRPGWTGSHCEDDINECLPQPCNQGICIQNDPGYGYTCFCRPGFVVRFPTLLLLLPP
HCTSA
Download sequence
Identical sequences H3DGN5
ENSTNIP00000019679 ENSTNIP00000019679 99883.ENSTNIP00000019679

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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