SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000020055 from Tetraodon nigroviridis 69_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000020055
Domain Number 1 Region: 327-602
Classification Level Classification E-value
Superfamily Mitochondrial carrier 5.36e-81
Family Mitochondrial carrier 0.0000467
Further Details:      
 
Domain Number 2 Region: 12-155
Classification Level Classification E-value
Superfamily EF-hand 1.19e-20
Family Calmodulin-like 0.037
Further Details:      
 
Domain Number 3 Region: 160-285
Classification Level Classification E-value
Superfamily EF-hand 0.000000000536
Family Calmodulin-like 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000020055   Gene: ENSTNIG00000016936   Transcript: ENSTNIT00000020286
Sequence length 679
Comment pep:novel chromosome:TETRAODON8:2:13774060:13788845:1 gene:ENSTNIG00000016936 transcript:ENSTNIT00000020286 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAVKVQVTKRADPHQLKAIFLKYASVLDDGEHYMTPRDFVQSYLGLHAQPRFNPKTVDLL
AGVADTTKDGLISFQEFLAFESVLCAPDALFIVAFQLFDKTGTGNISFENVRDIFSQTTV
HHHIPFNWDCEFIRLHFGQERNKNLSYTEFTQFLQQELQSEHARQAFAQKDKSKSGTITA
LDFSDIMATIRHHMLTPFVEENLVSAAGGGTSHMVSFSYFNAFNALLNNMELIRKIYSTV
AGTHRDTLVTKEEFVNAANKFGQITPMEIDILYQLVGLHSHSGRLQQADIERIAPLEEGA
MPYHQAEVLRQHPHELSRPVWLQAAESAYRFTLGSIAGATGATAVYPIDLVKTRMQNQRS
TGSLVGELMYKNSFDCAKKVLRYEGFFGFYRGLLPQLIGVAPEKAIKLTMNDFVRDKFTS
VDGAIPLPAEILAGGCAGASQVIFTNPLEIVKIRLQVAGEITTGPRVSALNVVRELGFFG
LYKGAKACFLRDIPFSAIYFPVYAHSKEKIADADGKLGPLQLLAAGAIAGVPAASLVTPA
DVIKTRLQVAARAGQTTYNGVIDCFQKILKEEGFRAFWKGAGARVFRSSPQFGVTLVTYE
LLQRWFYVDFGGHRPAGFVPTPKPAVEGLPSVTADHVGGYRLAAATFAGVERKFGLHLPK
FEPSGAARTQASEAGAEPQ
Download sequence
Identical sequences H3DHR1
ENSTNIP00000020055 ENSTNIP00000020055 99883.ENSTNIP00000020055

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]