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  Home > Genomes > Tetraodon nigroviridis 69_8 > ENSTNIP00000020233

Domain assignment for ENSTNIP00000020233 from Tetraodon nigroviridis 69_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000020233
Domain Number 1 Region: 309-426
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000000628
Family Growth factor receptor domain 0.014
Further Details:      
 
Domain Number 2 Region: 901-1026
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000235
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 3 Region: 1152-1269
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000722
Family Growth factor receptor domain 0.014
Further Details:      
 
Domain Number 4 Region: 61-193
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000118
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 5 Region: 588-711
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000392
Family Growth factor receptor domain 0.018
Further Details:      
 
Domain Number 6 Region: 182-309
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000565
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 7 Region: 473-599
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000832
Family Growth factor receptor domain 0.02
Further Details:      
 
Domain Number 8 Region: 711-837
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000643
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 9 Region: 1021-1143
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000675
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 10 Region: 17-72
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000331
Family EGF-type module 0.014
Further Details:      
 
Domain Number 11 Region: 435-490
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000634
Family EGF-type module 0.028
Further Details:      
 
Domain Number 12 Region: 860-911
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000257
Family EGF-type module 0.0095
Further Details:      
 
Domain Number 13 Region: 1314-1345
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000317
Family EGF-type module 0.011
Further Details:      
 
Domain Number 14 Region: 1269-1302
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000726
Family EGF-type module 0.016
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000020233
Domain Number - Region: 829-854
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00545
Family EGF-like domain of nidogen-1 0.06
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000020233   Gene: ENSTNIG00000017099   Transcript: ENSTNIT00000020464
Sequence length 1348
Comment pep:novel chromosome:TETRAODON8:Un_random:95303373:95307878:-1 gene:ENSTNIG00000017099 transcript:ENSTNIT00000020464 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
NFTCACRMGYQGDGLLCSDIDECLSGLHSCHPKARCNNTLGSYRCFCLSGYIGDGTQCQD
INECQEDNGGCHANALCTNYEGGRGCTCKDGFTGDGFQCSDVNECKNQKICHWNATCTNN
PGSYACTCNAGYKGNGNYLCLDIDECSETPYVCSSSLGYKGCKNLPGSYRCTCSRGFESN
GQSCVDIDECTDNICSLYADCVNTMGSYQCTCNKGFIGNGLTCADINECNEHNQCDPDAV
CINRLGSYECSCLEGYLGDGRQCEDINECATPDMCPSTTTCVNTGGSYYCDCGIGFIFNN
SMCYDLDECKTGRCSRFAACANSPGSFSCQCISGYRGDGFTCVDMDECLLAEQCHPNALC
INIPGSYNCTCWVGYTGDGVFQCNDVNECLVDNGGCANRATCVNNRGSFTCLCPSGFVLV
NKTLCQDIDECKELNNPCGVNEECKNNDGSFKCSCQVGYYRLANNMDCVDLDECKNNPCH
TNATCLNTIGSHTCTCKRGFSGNGTQCKDIDECSAKGTCHSRALCTNYIGSYFCTCQEGF
VGDGFFCEDVDECSLPETKCPSFSKCVNSPGAHVCSCLNSTLAVNDTCVLPSLLCEPACH
RHGLCHKSPAGYQCVCDQGYVGDGITCSDIDECQMENICPEKETECINTPGSFACVCRKG
YSLNSTTCLDVNECATGQQECSEFARCVNTIGSHSCFCLSGFTGDGKNCFDFDECQVQNG
GCHPVASCTNTPGLFFCACPPGMDGNGFDCQDVNECEQNASRPHNCSAQALCHNTNGSYT
CQCQDGYHGDGFACKDVDECQLTTTCDVNMKCTNTHGSYVCSCILGAVLCDPLARCHQQR
DSFYCQCVGGYEGSGTECLDVDECSQSQVCHAFSDCFNTNGSYFCDCWEGFQDNGTHCQD
LNECETGNVSCPANSTCTNTEGSYECICDSGFSANNSVCLDVDECDLGISQCPAFSKCMN
TFGSFVCDCWDGYHANNSYCEDINECQVNSTCPEHSMCINTNGSYLCVCNDGFSKVGELC
VDVDECSDAKMGELCTNGTCINVAGSYFCDCFKGFWGNGTTCEDIDECRASSNITVCQPN
SMCVNNPGSYYCPCNKGFILNGTQCQDVDECHDLDRWPCPQHGLCNNTAGSFFCLCSPGY
EATIDGCGDIDECKDNITCRFDQVCTNQPGGYECSCPSGFHEEKQTCVDTNECEKSPCHL
LAHCWNTPGSYSCHCPVGFAGNGSWCKDVDECDALSNPCHHQALCYNTPGSFLCVCNAGF
TSIGPLCVDLDECQQTNWHCHSTATCSNHVGSFECSCGQGWSITNLEDCKLGCVDLDECV
SPTICPGPTFCINLPGSYSCTCPSNNSM
Download sequence
Identical sequences H3DI89
ENSTNIP00000020233 99883.ENSTNIP00000020233 ENSTNIP00000020233

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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