SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000014525 from Tetraodon nigroviridis 69_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000014525
Domain Number 1 Region: 131-378
Classification Level Classification E-value
Superfamily vWA-like 4e-83
Family Integrin A (or I) domain 0.00000000535
Further Details:      
 
Domain Number 2 Region: 374-463
Classification Level Classification E-value
Superfamily Integrin domains 1.83e-29
Family Integrin domains 0.0000133
Further Details:      
 
Domain Number 3 Region: 634-718
Classification Level Classification E-value
Superfamily Integrin beta tail domain 3.92e-24
Family Integrin beta tail domain 0.0000293
Further Details:      
 
Domain Number 4 Region: 23-81
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000000241
Family Plexin repeat 0.00023
Further Details:      
 
Domain Number 5 Region: 550-588
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000307
Family Integrin beta EGF-like domains 0.0094
Further Details:      
 
Domain Number 6 Region: 592-633
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000419
Family Integrin beta EGF-like domains 0.001
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000014525
Domain Number - Region: 520-550
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0137
Family Integrin beta EGF-like domains 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000014525   Gene: ENSTNIG00000011575   Transcript: ENSTNIT00000014724
Sequence length 790
Comment pep:novel chromosome:TETRAODON8:2:8772832:8782485:1 gene:ENSTNIG00000011575 transcript:ENSTNIT00000014724 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLRSRPLVCVKVKFFFFLLVPGSNVCTTRGASTCKQCLAVHPSCAWCFQEDFGLGVSSSP
RCDLKRNLVAAGCAASAVESPTSKLQVVEDRPLSNKATLATQDITQIKPQRLHINLRPDD
AKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMSRTTSNLRMGFGAF
VDKPLSPYMYISPKEAVKNPCYSINMTCLPQFGYKHVLTLTEEVGRFTEEVKKQMVSRNR
DAPEGGFDAIIQAAVCKEQIGWRPGASHLLIFTSDAKTHVALDGRLAGIVQPNDGKCHLN
SENMYSMSTTMDYPSLALITEKMSENNINLIFAVTNPVVRLYQNYSELIPGTTVGTLNND
SGNVIQLILKAYAKIRSKVELELQGVPEELALSFNASCLNGELIPGLKSCSGLKIGDTVS
FTVEARARGCPKEKKKTFVIKPVGFKDTLSITVTFECDCKCQARAQPSSPKCNHGNGTYE
CGICMCHPGRLGPHCECAEGDYDPTEQDSCSGPTGSGGRASVCSGRGDCVCGQCVCHSSD
FGKVWGKLCECDDFNCLHYKGELCSGHGVCNCGFCQCAPDWQGDNCNCSRRTDTCMSGMG
LLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGKLFEGSTCS
RICKDEIVLVDELGSEVTNAVNCSYKDEDDCVQRFQYYEEASGKSILYVVKEPDCPKGPD
ILVVLLSVAGAILFLGLAALLIWKLLITIHDRREFAKFEEERARAKWDTGHNPLYKGATS
TFTNITFRGK
Download sequence
Identical sequences H3CN97
ENSTNIP00000009728 ENSTNIP00000014525 99883.ENSTNIP00000009728

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]