SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for APC29388 from TargetDB

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  APC29388
Domain Number 1 Region: 140-295,417-596
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.28e-32
Family Extended AAA-ATPase domain 0.076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) APC29388
Sequence length 610
Comment $ MCSG $ SQ22991 $ PDBT68905 $
Sequence
MMTNNSNIEVALVVEVNGIRCKAITFDDMNQATYINNGEVIKNLSVNSFVVIRQNFIKII
GRINSESIWDTQNNKQNYQLDNRFSKNTIKRILDIQIIGYISEGCFTTGTTYIPMIGNIC
SIPTTEETQTIYVNSFDHFNGDQTIKIGKSLNEQIEVNLPISSFFASHIGIFGNTGSGKS
NTLHKLYFELFKQSFPLLREKSRFVVIDFNGEYVHDNSFGVPKSEKNIYELSTRTVSNKR
LQIKRDIFFSSEILSILFSATQQTQKPFLERVLKGINKFGFGEESLQRWISSILREIFTT
FPNMDLKNRFVSILGEFYDSSEALEPIKQAQIYSKDDPAKFIVNGTFFDGNWESKHMQAV
NLEQVENVILTEKLNIFKEFELRCKLQLVKDLLYRNVISDHIDPLLKRIDSRIEDFQKYI
EIVGQIDNVKFLEIISLRDLNQEAKQIVAMLTSKMFFDEQKTSKDKVSFHLIIDEAHNIL
SDQSRNDNTSWKDYRLSTFEEIIKEGRKFGFFLTLSSQRPADISPTLLSQVHNFFLHKLV
NERDLQIIDNSLSTLDRVSKSMLPGLSQGICIITGTALSLPMIVNVDFISDKTLRPQSDT
VDLVEAWVNE
Download sequence
Identical sequences A0A059MZN9 A0A0U1AWZ5 A0A1Q1FVT0 E6GYC2 E6H5F4 J5DQL6 J5H469 J5IGA5 J5J2Y1 J5YVJ7 J5YVK8 J6AV14 J6AXB5 J6CZM9 J6F9A5 J6N960 J6PAY6 J6Q0Z6 J6Q2U5 J6QAW9 J6QHW5 Q831Z4
APC29388 NP_816003.1.90627 WP_002387067.1.100343 WP_002387067.1.100482 WP_002387067.1.101272 WP_002387067.1.101818 WP_002387067.1.10696 WP_002387067.1.11193 WP_002387067.1.11651 WP_002387067.1.12926 WP_002387067.1.1344 WP_002387067.1.13739 WP_002387067.1.14157 WP_002387067.1.14180 WP_002387067.1.15543 WP_002387067.1.15705 WP_002387067.1.16241 WP_002387067.1.16763 WP_002387067.1.17287 WP_002387067.1.17799 WP_002387067.1.18048 WP_002387067.1.18260 WP_002387067.1.20659 WP_002387067.1.23054 WP_002387067.1.23498 WP_002387067.1.23569 WP_002387067.1.24064 WP_002387067.1.25180 WP_002387067.1.27216 WP_002387067.1.274 WP_002387067.1.2799 WP_002387067.1.28185 WP_002387067.1.28932 WP_002387067.1.29627 WP_002387067.1.31656 WP_002387067.1.32099 WP_002387067.1.32265 WP_002387067.1.33306 WP_002387067.1.33460 WP_002387067.1.33574 WP_002387067.1.34192 WP_002387067.1.34256 WP_002387067.1.35810 WP_002387067.1.35823 WP_002387067.1.36900 WP_002387067.1.39119 WP_002387067.1.39932 WP_002387067.1.4014 WP_002387067.1.41053 WP_002387067.1.42483 WP_002387067.1.43903 WP_002387067.1.44185 WP_002387067.1.44242 WP_002387067.1.44626 WP_002387067.1.45925 WP_002387067.1.46056 WP_002387067.1.46348 WP_002387067.1.47407 WP_002387067.1.47856 WP_002387067.1.47867 WP_002387067.1.49131 WP_002387067.1.49961 WP_002387067.1.52926 WP_002387067.1.55065 WP_002387067.1.57048 WP_002387067.1.57136 WP_002387067.1.57211 WP_002387067.1.57542 WP_002387067.1.58620 WP_002387067.1.5872 WP_002387067.1.59698 WP_002387067.1.59964 WP_002387067.1.60361 WP_002387067.1.60394 WP_002387067.1.61083 WP_002387067.1.63148 WP_002387067.1.63507 WP_002387067.1.63848 WP_002387067.1.63884 WP_002387067.1.6473 WP_002387067.1.66316 WP_002387067.1.66898 WP_002387067.1.69648 WP_002387067.1.70675 WP_002387067.1.73824 WP_002387067.1.77328 WP_002387067.1.7819 WP_002387067.1.78503 WP_002387067.1.78641 WP_002387067.1.7958 WP_002387067.1.79975 WP_002387067.1.80104 WP_002387067.1.80452 WP_002387067.1.80556 WP_002387067.1.81327 WP_002387067.1.81575 WP_002387067.1.82993 WP_002387067.1.83327 WP_002387067.1.83490 WP_002387067.1.8380 WP_002387067.1.84260 WP_002387067.1.86134 WP_002387067.1.89791 WP_002387067.1.90371 WP_002387067.1.90503 WP_002387067.1.90872 WP_002387067.1.91394 WP_002387067.1.93277 WP_002387067.1.94399 WP_002387067.1.94630 WP_002387067.1.94964 WP_002387067.1.95340 WP_002387067.1.95445 WP_002387067.1.95534 WP_002387067.1.9570 WP_002387067.1.96481 WP_002387067.1.96745 WP_002387067.1.97078 WP_002387067.1.98868 WP_002387067.1.99 WP_002387067.1.99022 WP_002387067.1.9925 WP_002387067.1.99432 gi|29376849|ref|NP_816003.1| 226185.EF2348

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]