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Domain assignment for NYSGXRC-10414k from TargetDB

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  NYSGXRC-10414k
Domain Number - Region: 588-667
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.00935
Family CBM4/9 0.038
Further Details:      
 
Domain Number - Region: 416-500
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0342
Family Fibronectin type III 0.0073
Further Details:      
 
Domain Number - Region: 1009-1096
Classification Level Classification E-value
Superfamily Histone-fold 0.0753
Family Nucleosome core histones 0.08
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NYSGXRC-10414k
Sequence length 1172
Comment $ NYSGXRC $ SQ106276 $ PDBT184286 $
Sequence
MADMWILDDKDKKQTIISSEAKEACRFYDAPFREELNVGSSFSFVADADHEDSVHIKPEN
QVVFEDRRGRKRNFVIKELEDADDGANARIRAYCEPALSELYDEFVTDIRPQNRTAQYVL
DRILEGTRWRANVPVDLGLHSTNFYRISVMEAINQILQIWGGEYYDEVVFDENDNIVDRV
IHILPRRGQDTGKRAEIDKDIQEITRTVLSYPVTALYGYGASLETEGGGNTRYIDFSDVE
WVKANGDPVDKPKGQEWVGDPDLLEKFGRIMYDGQTKRHRFQKWQDDSIEDPAELLRKTY
EALINHEMVQVNYSLKLELLEYISGYEHEAVDLGDTMIAIDDNFRHPIEVQTRVIAIEYD
LSDPVNTAQVEMGQFLDLYSTEKRIKELETTIDTNRGKWDNGGDPIIGDGSFPDKVPPVP
SNIKVESLFQGVSITWDYNPSSYIAAYQIFASPNKGFTPLDENLIFSGKLSGYEHTPGVD
QVWYYRMRTINTHGTPSPFTQEFTGVTRRILTDDIVFGAVTAEKLANLSVTAEKLSQKFD
ESNILPGSVLRPGELGNVNGASWSVKEGEFNEVTVTRKADDTRAGFGFSAFYRSTLRLTK
GEKYTLSFEVKRNNTLNINFIYLKDDSGQYQLDAPDFNDISSFPSDEFVRVDYVFQSPIT
TETARLWLGGNKVGDENPSVTYRKIQIRKGDVRKEFAFSPYDVMLTEQAVSSALIAKAAI
QSAHIQEAAITTAAIANGAITRAKLGTAIIGTAQIEDGAITNAKIANLSADKINAGTIKG
ITIEGSLIRGARIEPLSSSSAYESYIEANKIYQLRKTRYGGYQDRYEELDISSGSIIQDY
GNRLDDDSHESLNKVEISKGKVALSSGKTFSTGTTSRMEIFSQLGTSDNGLYGGNFITMY
RNDEKVFELRQDSWTDPDTNVIMPQMSIRAEKVDFVSFFEDVSVYSEKSIYHSAERSVAL
FSKDGPVTVYAKDGMKLNRGSNGEYTTSITADDALKIASKGTITLEDTEFNGASLYLGTD
SRGPRIWSYSINKRTTTAAANLHMDQYGTFHKVTSSQKYKINIEEFPNDRVENILKLNPK
TWFDKKAVEAYAEILESGQEDDENKPYFERIPGLIAEEVFEAGLKEFVFFGKPDENGNRE
IEGIMYDRLFALLIPIVRDLKTRIENIESTLN
Download sequence
Identical sequences A0A2J5ZZP9 Q65KN1
gi|52079876|ref|YP_078667.1| WP_011197882.1.10695 WP_011197882.1.1290 WP_011197882.1.7403 WP_011197882.1.74244 gi|404488758|ref|YP_006712864.1| 279010.BL00967 BiR61 NYSGXRC-10414k

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