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Domain assignment for NYSGXRC-13152a from TargetDB

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NYSGXRC-13152a
Domain Number 1 Region: 89-396
Classification Level Classification E-value
Superfamily L domain-like 2.61e-57
Family Leucine rich effector protein YopM 0.034
Further Details:      
 
Domain Number 2 Region: 489-629
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 1.94e-36
Family Gelsolin-like 0.00027
Further Details:      
 
Domain Number 3 Region: 609-720
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 2.42e-25
Family Gelsolin-like 0.00061
Further Details:      
 
Domain Number 4 Region: 1156-1267
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 1.31e-24
Family Gelsolin-like 0.00079
Further Details:      
 
Domain Number 5 Region: 899-943,979-1064
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 6.54e-24
Family Gelsolin-like 0.013
Further Details:      
 
Domain Number 6 Region: 748-857
Classification Level Classification E-value
Superfamily C-terminal, gelsolin-like domain of Sec23/24 2.51e-20
Family C-terminal, gelsolin-like domain of Sec23/24 0.01
Further Details:      
 
Domain Number 7 Region: 7-119
Classification Level Classification E-value
Superfamily L domain-like 4.18e-19
Family Internalin LRR domain 0.076
Further Details:      
 
Domain Number 8 Region: 1050-1146
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 0.0000000000000159
Family Gelsolin-like 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NYSGXRC-13152a
Sequence length 1271
Comment $ NYSGXRC $ SQ183716 $ PDBT175445 $
Sequence
MEATGVLPFVRGVDLSGNDFKGGYFPENVKAMTSLRWLKLNRTGLCYLPEELAALQKLEH
LSVSHNHLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSVLDLSHNQLTECP
RELENAKNMLVLNLSHNGIDSIPNQLFINLTDLLYLDLSENRLESLPPQMRRLVHLQTLV
LNGNPLLHAQLRQLPAMMALQTLHLRNTQRTQSNLPTSLEGLSNLSDVDLSCNDLTRVPE
CLYTLPSLRRLNLSSNQIAELSLCIDQWVHLETLNLSRNQLTSLPSAICKLTKLKKLYLN
SNKLDFDGLPSGIGKLTSLEEFMAANNNLELIPESLCRCPKLKKLVLNKNRLVTLPEAIH
FLTEIQVLDVRENPSLVMPPKPADRTAEWYNIDFSLQNQLRLAGASPATVAAAAAVGSGS
KDPLARKMRLRRRKDSAQDVQAKQVLKGMSDVAQEKNKNQEESIDARAPGGKVRRWDQGL
EKPRLDYSEFFTEDVGQLPGLTIWQIENFVPVLVEEAFHGKFYEADCYIVLKTFLDDSGS
LNWEIYYWIGGEATLDKKACSAIHAVNLRNYLGAECRTVREEMGDESEEFLQVFDNDISY
IEGGTASGFYTVEDTHYVTRMYRVYGKKNIKLEPVPLKGSSLDPRFVFLLDQGLDIYVWR
GAQATLSNTTKARLFAEKINKNERKGKAEITLLVQGQEPPGFWDVLGGEPSEIKNHVPDD
FWPPQPKLYKVGLGLGYLELPQINYKLSVEHKKRPKVELMPGMRLLQSLLDTRCVYILDC
WSDVFIWLGRKSPRLVRAAALKLGQELCGMLHRPRHTVVSRSLEGTEAQVFKAKFKNWDD
VLTVDYTRNAEAVLQGQGLSGKVKRDTEKTDQMKADLTALFLPRQPPMPLAEAEQLMEEW
NEDLDGMEGFVLEGRKFTRLPEEEFGHFYTQDCYVFLCRYWVPVEYEEEEKTEDKEGKAS
AEAREGEEAAAEAEEKQPEEDFQCIVYFWQGREASNMGWLTFTFSLQKKFESLFPGKLEV
VRMTQQQENPKFLSHFKRKFIIHRGKRKVTQGTLQPTLYQIRTNGSALCTRCIQINTDSS
LLNSEFCFILKVPFESEDNQGIVYAWVGRASDPDEAKLAEDILNTMFDASYSKQVINEGE
EPENFFWVGIGAQKPYDDDAEYMKHTRLFRCSNEKGYFAVTEKCSDFCQDDLADDDIMLL
DNGQEVYMWVGTQTSQVEIKLSLKACQVYIQHTRSKEHERPRRLRLVRKGNEQRAFTRCF
HAWSTFRQAPA
Download sequence
Identical sequences Q9JJ28
ENSMUSP00000002889 ENSMUSP00000002889 ENSMUSP00000002889 10090.ENSMUSP00000002889 NP_071292.1.92730 NYSGXRC-13152a

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