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Domain assignment for NYSGXRC-6450b from TargetDB

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NYSGXRC-6450b
Domain Number 1 Region: 568-770
Classification Level Classification E-value
Superfamily Duplicated hybrid motif 7.32e-53
Family Peptidoglycan hydrolase LytM 0.00075
Further Details:      
 
Domain Number 2 Region: 798-924
Classification Level Classification E-value
Superfamily Cysteine proteinases 3.14e-32
Family NlpC/P60 0.0047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NYSGXRC-6450b
Sequence length 925
Comment $ NYSGXRC $ SQ165413 $ PDBT173194 $
Sequence
VSRERFQAREKKVQKMGRDGLVEQNRATGEEKRVSQRTADTAFDRARPTEREDIRRPAAR
GADTGKKRKQPRTAPEMAAEQTEPLLTPEYLADSTAEPPPDAPASMRGAVDMPLLDAPIA
EEPTPAPVRKQPQKRGKKGKKKQSTKFTEDAARPGSEEKTAMRGVEGAPAPKRRTSEGGS
RLQFDKEEEPADPAADRAAIRKRQTAKLAEHAAKPEDKLKSDGNPKAGETRLKFEDTPKD
TDISGDTAPDMPTRQQKKYNKAACRTERADRRVEQAQMKLPAKRRLHMDHQPDEASGKIK
RRLRFEDEILPEYQKPSLSSRAGNAAKTAAVLKLHGKLREYERDNVALESAHKIELVAEQ
GAGRVLRWERNRRRSKPYRTLRKAQQKAARAHTDLAWQTALRDNPELQRKNALAKWVQKQ
KIKRKYAQAAHEAKQSAKFTQNVLTATGKIARAIAQYAAAHKAVFLAVAMLALVVMFFAT
GLTSCTAMLSGFQSSYISASYMANEQEICQSDLYYTEKETDLQIDIDKTEENYPGYDEYR
YNIGEISHNPYELLGYLSTAFNAFTFAEVQPEIDRIFSRQYTLTREVIVETRYDDDGDPY
DWYVLQTTLAVRPLSSVLQSSLTPGEQTDRYGVYMQTYGNRQAFGNPFGFSWLGYVSSGY
GWRVHPVNGEKSLHRGIDLAVAQGTPILAAQDGRVVSAGDAGSYGLCVVIEDDKGYQSRY
AHCSSLNVSAGQEVKRGDVIAAVGSTGNSTGPHLHLEVMLNGEYLNPYFFVDNGDDGTGA
IPGTPGGPAIPDYSGEPMGDGSFEAMLREAEKYLGYPYVWGGSHPSTSFDCSGYVSWVIN
QSGVGSVGRQTAQGLYNLCTPVSAVNAQPGDLIFFTGTYSSPGPVSHVGIYVGGGRFIHC
GDPISYANTGSPYWSAHLYGYGRIP
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Identical sequences NYSGXRC-6450b

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