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Domain assignment for Pfal003339AAA from TargetDB

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Pfal003339AAA
Domain Number 1 Region: 35-118,160-205,504-632
Classification Level Classification E-value
Superfamily Ribonuclease H-like 8.59e-53
Family DnaQ-like 3'-5' exonuclease 0.075
Further Details:      
 
Weak hits

Sequence:  Pfal003339AAA
Domain Number - Region: 781-845
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.000692
Family Canonical RBD 0.021
Further Details:      
 
Domain Number - Region: 711-746
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.0164
Family CAF1-like ribonuclease 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Pfal003339AAA
Sequence length 870
Comment $ SGPP $ SQ69602 $ PDBT227694 $
Sequence
MAHHHHHHMSSVFNYFFKNFVLKEKRNLFFKYNILERGYSKITSVNLNNWNNIHKEIIQK
INNSDFVSIDVEYTGLHLKDERYISLDSSYEAHCYGAKSFFPCQIGISIAKKKDIVEDLY
QTDEENNKIKKKSSVHTRKVIYENGNMNKICNIEKKKQEWHISPYCIYVFPKENKYFSVS
TSTLSFLKENNFDFNEWIFNGVGYLRPNEEEEKKKNIVEKINELNNLLSKCNTNKKNIIP
GEKIHIDKIIQEIENYKIVDDEDKEAIISIIKKIGKWINNTNNDKNYCKHEEDKKKLNMN
KDTSINYINNNKDKANGNDIHIHIPTTNIDNNNIYNITNNIVKEKTFASLNNNFIQKQKN
ELTNNNVYNVKQTFSSINSNIKNIPNNYITNEDVYDNNEKIINKSTKENDNKCYNNIHNN
DTIGHIECDINNMDDISNYPLYLEIENPYLRLLAHTLITKYFDSIFCISVKVNDRKHLAV
YRSEKDSYKEQIKNLEQEIEKINQIIGVRLLFDEIIKNKKIIIGHNCFYDILHIYQTFYH
DLPKSINVFKKKWTELFPHTFDTKYINETNEYLYALNGPATLKGLCEYMASLISSSNDFD
FFFNFMNDPTDLPQCFIPFINPKKMTKYNMTQNFIHQKNNMLYSNDGNNMENDKIQQELL
YGTKGDNIIPNRSIELNSENNTLKNNNNNNDNYNENNMIYVNNTNDKHILNSDEHNAGYD
SLLTCLLFIFQCHYILKKNNLMWKDIYFSESNKANNTNSKYFFDIFLNMSNKIKIVKTQP
NVISLCSAENYEMSRHFYMYDYPRYFKKWEIMKIWSPIWITLSKVDDQSCWIIAKSDDDA
KNIKMIYKMLQNPQFKLCTYEEYIHKFKSN
Download sequence
Identical sequences Pfal003339AAA

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