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Domain assignment for RNG_ECO57 from TargetDB

Domain architecture


Domain assignment details

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Strong hits

Sequence:  RNG_ECO57
Domain Number 1 Region: 45-134
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.62e-19
Family Cold shock DNA-binding domain-like 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) RNG_ECO57
Sequence length 495
Comment $ BSGI $ SQ76631 $ PDBT239523 $
Sequence
MRKGINMTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQ
AAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGT
KGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAA
EGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFADAELDRIRVD
SRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVELKSGGYLII
DQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNE
DHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTV
KTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHSLAEVEIFVGKQVKVQ
IEPLYNQEQFDVVMM
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Identical sequences A0A090NKK2 A0A0A6ZZL8 A0A192CDD4 A0A1X3I379 A0A1X3IYT7 A0A1X3JCI9 A0A1X3K6Y8 A0A1X3KYS3 F4NHM6 F4SNX4 F4T3X6 F4TK13 F4V6X4 F4VJP4 J7R6D9 J7RLJ8 Q1R693 Q31WB5 Q32B93 Q3YX02 W8ZXM2
RNG_ECO57 gi|560159259|ref|YP_008851974.1|

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