SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for SiR145 from TargetDB

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  SiR145
Domain Number 1 Region: 30-255,357-408
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 1.15e-38
Family FAD-linked reductases, N-terminal domain 0.07
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SiR145
Sequence length 435
Comment $ NESG $ SQ143316 $ PDBT144144 $
Sequence
MPLSKIRQTPFWHDQLGAMPALQTQPSAKVDVLIVGAGYTGLSAALTTARGGRSTLVMDA
EDPGYGCSSRNGGQISTSVKPSLEKLTAKFGPERARGIRAEGANALRWIGEFVGGEGLDC
DFRRVGRFHAAHTPGHYEELVRDAETLRQQEGIESFAVPRAEQRSQLGTDAYFGGVVFSA
HCSLHPGKFHRELLRLAIGAGAQVVGQCRVGAITRSGSGFQVETAKGVVEARDVIVATNG
YTTALTPWLQRRVIPIGSYIIATEELPEATIDELFPGDRIASDTCKVVYYYRASPDRRRV
LFGGRVSASETTALAGAARLRHDMCRIFPQLEGVALSHAWSGTVAYSFDELAHTGVQEGI
HFAMGYCGSGVSMAPYLGMRAGQKVLGLAEGQTAFDGLPFPTRPLYRGKPWFLPAAVAWY
RWKDQRQFRKALQMT
Download sequence
Identical sequences Q5LKK1
gi|56709162|ref|YP_165207.1| WP_011242157.1.46818 gi|56709162|ref|YP_165207.1|NC_006569 SiR145 246200.SPOA0380

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]