SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOARP00000020848 from Ovis aries 76_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOARP00000020848
Domain Number 1 Region: 190-302
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.00000000000000366
Family Spermadhesin, CUB domain 0.0064
Further Details:      
 
Domain Number 2 Region: 397-434
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000223
Family LDL receptor-like module 0.00081
Further Details:      
 
Domain Number 3 Region: 136-173
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000109
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 4 Region: 33-135
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.000000017
Family Spermadhesin, CUB domain 0.003
Further Details:      
 
Domain Number 5 Region: 328-352
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000956
Family LDL receptor-like module 0.0029
Further Details:      
 
Weak hits

Sequence:  ENSOARP00000020848
Domain Number - Region: 354-396
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00353
Family LDL receptor-like module 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOARP00000020848   Gene: ENSOARG00000019406   Transcript: ENSOART00000021134
Sequence length 712
Comment pep:known_by_projection chromosome:Oar_v3.1:7:21570979:21579654:-1 gene:ENSOARG00000019406 transcript:ENSOART00000021134 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLPAILLLFLGGTVAHPDRIIFPNPACEDPPAVLLEAQGTLQRPVGRDSRSSPANCTWLI
LGRKEQTVTVRFQKLHLACGSERLTLRSPIQPQISLCEAPASPLQLPGGNVTITYSYVGA
RAPMGQGFLLSYSQDWLMCLQEEFQCLNHRCVPLFQRCDGVDACGDGSDEAGCSSDPFPD
LDLAPVLTPPCNHTLEDFYGVFSSLGYSHLASVSQPQSCRWLLDPRDGRRLAVRFTALDL
GYEDAVRVYDGAGPLETLRLLRSLTHFSNGKAVTVETLSGQATVDYRTVPWSTGRGFNAT
YHVRGYCLPWDRPCGLSSGLGASEGLGERCYSEAQRCDGSWDCADGTDEENCPSCPPGHY
PCGAAGTPGATACYLPADRCNYQTFCADGADERRCRHCQPGNFRCRDEKCVYETWVCDGQ
PDCADGSDEWDCSYALPRKVITAAVIGSLVCGLLLVIALGCTCKLYAIRTQEYSIFAPLS
RMEAEIVQQQAPPSYGQLIAQGAIPPVEDFPTENPNDNSVLGNLRSLLQILRQDMTPGST
SGARRRQRGRSMRRLVRRLRRWGLLPRTNPPARTPETRSQVTPSAAPPETLDGSTGPAHE
GGAVGGQDGEQAPPLPVKAPLPPSSISPAFPTVPEAPGPLPAVPLEPSLLSGVVQALRGR
LLPSLRPPGPTRVPPGPHTTVLSPEDEDDVLLVPLAEPGVWVVEAEDEPLLA
Download sequence
Identical sequences W5QDQ0
ENSOARP00000020848 XP_004010398.1.66739 XP_011984713.1.54773

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]