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  Home > Genomes > Tribolium castaneum 3.0 > TC000401

Domain assignment for TC000401 from Tribolium castaneum 3.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  TC000401
Domain Number 1 Region: 3833-4043
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 7.71e-36
Family Laminin G-like module 0.0017
Further Details:      
 
Domain Number 2 Region: 2278-2404
Classification Level Classification E-value
Superfamily Cadherin-like 1.13e-34
Family Cadherin 0.00096
Further Details:      
 
Domain Number 3 Region: 1158-1292
Classification Level Classification E-value
Superfamily Cadherin-like 7.14e-31
Family Cadherin 0.0011
Further Details:      
 
Domain Number 4 Region: 3117-3219
Classification Level Classification E-value
Superfamily Cadherin-like 1.57e-30
Family Cadherin 0.00075
Further Details:      
 
Domain Number 5 Region: 3220-3331
Classification Level Classification E-value
Superfamily Cadherin-like 3.28e-30
Family Cadherin 0.00076
Further Details:      
 
Domain Number 6 Region: 2799-2923
Classification Level Classification E-value
Superfamily Cadherin-like 6.41e-30
Family Cadherin 0.0015
Further Details:      
 
Domain Number 7 Region: 3325-3436
Classification Level Classification E-value
Superfamily Cadherin-like 8.99e-30
Family Cadherin 0.00071
Further Details:      
 
Domain Number 8 Region: 951-1056
Classification Level Classification E-value
Superfamily Cadherin-like 1.23e-29
Family Cadherin 0.0019
Further Details:      
 
Domain Number 9 Region: 1610-1746
Classification Level Classification E-value
Superfamily Cadherin-like 9.85e-28
Family Cadherin 0.00085
Further Details:      
 
Domain Number 10 Region: 1504-1618
Classification Level Classification E-value
Superfamily Cadherin-like 3.71e-26
Family Cadherin 0.00099
Further Details:      
 
Domain Number 11 Region: 368-473
Classification Level Classification E-value
Superfamily Cadherin-like 4.19e-26
Family Cadherin 0.001
Further Details:      
 
Domain Number 12 Region: 843-950
Classification Level Classification E-value
Superfamily Cadherin-like 4.28e-25
Family Cadherin 0.00055
Further Details:      
 
Domain Number 13 Region: 2493-2602
Classification Level Classification E-value
Superfamily Cadherin-like 4.97e-25
Family Cadherin 0.0025
Further Details:      
 
Domain Number 14 Region: 2590-2729
Classification Level Classification E-value
Superfamily Cadherin-like 6.28e-25
Family Cadherin 0.0034
Further Details:      
 
Domain Number 15 Region: 1051-1169
Classification Level Classification E-value
Superfamily Cadherin-like 5.85e-24
Family Cadherin 0.00088
Further Details:      
 
Domain Number 16 Region: 1819-1939
Classification Level Classification E-value
Superfamily Cadherin-like 6.67e-23
Family Cadherin 0.0014
Further Details:      
 
Domain Number 17 Region: 145-272
Classification Level Classification E-value
Superfamily Cadherin-like 9.28e-23
Family Cadherin 0.0033
Further Details:      
 
Domain Number 18 Region: 469-569
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-22
Family Cadherin 0.0017
Further Details:      
 
Domain Number 19 Region: 3424-3548
Classification Level Classification E-value
Superfamily Cadherin-like 3.28e-22
Family Cadherin 0.00089
Further Details:      
 
Domain Number 20 Region: 740-850
Classification Level Classification E-value
Superfamily Cadherin-like 2.43e-21
Family Cadherin 0.0018
Further Details:      
 
Domain Number 21 Region: 1927-2056
Classification Level Classification E-value
Superfamily Cadherin-like 1.03e-20
Family Cadherin 0.0042
Further Details:      
 
Domain Number 22 Region: 3006-3104
Classification Level Classification E-value
Superfamily Cadherin-like 2.14e-20
Family Cadherin 0.00088
Further Details:      
 
Domain Number 23 Region: 2911-3018
Classification Level Classification E-value
Superfamily Cadherin-like 7.71e-19
Family Cadherin 0.0014
Further Details:      
 
Domain Number 24 Region: 1722-1825
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-18
Family Cadherin 0.003
Further Details:      
 
Domain Number 25 Region: 1412-1516
Classification Level Classification E-value
Superfamily Cadherin-like 5e-18
Family Cadherin 0.0022
Further Details:      
 
Domain Number 26 Region: 2132-2224
Classification Level Classification E-value
Superfamily Cadherin-like 6.71e-18
Family Cadherin 0.0019
Further Details:      
 
Domain Number 27 Region: 575-685
Classification Level Classification E-value
Superfamily Cadherin-like 2.28e-16
Family Cadherin 0.0035
Further Details:      
 
Domain Number 28 Region: 1270-1293,1329-1405
Classification Level Classification E-value
Superfamily Cadherin-like 5.89e-16
Family Cadherin 0.0053
Further Details:      
 
Domain Number 29 Region: 2390-2488
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000000131
Family Cadherin 0.0031
Further Details:      
 
Domain Number 30 Region: 272-374
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000000443
Family Cadherin 0.0072
Further Details:      
 
Domain Number 31 Region: 2038-2144
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000000842
Family Cadherin 0.0038
Further Details:      
 
Domain Number 32 Region: 2705-2802
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000565
Family Cadherin 0.0037
Further Details:      
 
Domain Number 33 Region: 2225-2290
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000929
Family Cadherin 0.0055
Further Details:      
 
Domain Number 34 Region: 3538-3633
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000262
Family Cadherin 0.0099
Further Details:      
 
Domain Number 35 Region: 4164-4202
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000182
Family EGF-type module 0.0064
Further Details:      
 
Domain Number 36 Region: 4054-4091
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000288
Family EGF-type module 0.0099
Further Details:      
 
Domain Number 37 Region: 32-157
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000675
Family Cadherin 0.0071
Further Details:      
 
Domain Number 38 Region: 4086-4127
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000014
Family EGF-type module 0.011
Further Details:      
 
Domain Number 39 Region: 3808-3851
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000568
Family EGF-type module 0.034
Further Details:      
 
Weak hits

Sequence:  TC000401
Domain Number - Region: 4130-4168
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000335
Family EGF-type module 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) TC000401
Sequence length 4637
Comment GLEAN_00401
Sequence 
MSHSAFACSLLVIVLTQVVSEGALSTEVDFRFSRPLYNVSIPENSVAKTYASQAPGAERM
GIHVRSNTLSDIRYKIVDGDRDKFFKAEDRLVGDFCFLFIRTRTGNNDVLNRERKDKYVL
QVRATATKRDGKQKVSYTTDATVVVTVLDTNDLNPLFYPTEYNATVFEDTPIHQSILKVV
AEDADLGRNGEIYYSFAEETDKFAIHPMSGVISLSRPLRYNEGTYHELTVLGQDRGAVFR
HGSGMVSKAKVRIRVKKVNFFAPEIRIRHHPQIVENSNADIYAIVNVSDKDSGIHGEIKS
LEIVDGDPDGHFRIRPTKQKGEFNIEVLKLLDRESTPQGYTLKLRAVDRGVPPRESYKSV
PVHLTDLNDNAPVFNKEIYEVKVPETAPVNTPLIRLKVTDADEGRNAQVFLEIVGGNEGG
EFNINPETGMLYTAVPLDAESKQFYSLTVSAIDQGNAGTRKQSSAKVKIYVEDTNDNDPI
FDESEKFVPIDENLPAGTSVTTVHAKDRDRGENAYISYLIANINKVPFEIDHFSGIIKTT
SLLDYESMRREYVLRVRASDWGLPYRRQTEMQLTVKVQDVNDNRPQFEKVDCIGVIPRSI
SIGSEIITLSAIDFDSGNIISYRIVSGNEDGCFSIDTTSGTITVSCDLNDIRVSEREINV
TATDGTHFADIARVHFKLVNTKRNSMPAGRLLSDDTGAFECKDTGVARRLTEVLAAAENN
NKPPTEEEFPMMPTRYGQNLKSPEFIDFPAEIKVNESVALGTTLVKLKARDRDLGYNGKL
IYGISGGDKHSQFCVDMDTGELKVIGYLDRERESEYFLNITLYDLGKPQKSASRMLPITV
LDVNDNAPVFERSLASFRVTENALNGTAIFRANATDADAGDNAKVTYSLITDTRDFAVDR
TTGVLAVSNTLDRERQDLYELRIRATDGGGKGPDNPPLYSEALVRISIDDINDNAPKFSL
PAYTVKIREDIPKGSVVAVVTASDPDLGSDGEVVYFLEDSDSDGTFKIDRLSGTIRTTKP
LDFEERQVHSLIAFASDKGNPSLSSEASVTIYVVDVNENMHAPLFSDMVLNGTVKENQPV
GTVVMQVNATDADPPGGDSNIEYSIRGGDGIGIFSIDNEGIIRTLAVLDIETKSHFWLTV
FAQDHGVVPLYSSVEVYIEVLNENDNVPLSDEAVYYPTILEDSPAGSSVLQIRASDKDKD
PNQKITYKITSGSPERFFSINSSTGLITTTSRKLDRETLDEHILEVQISDNGSPPLSSTT
YVVVKIDDINDNAPEFEQISYSVQIPASADFNQAVFQNDSPDDFDGADAATDDDMWDSHS
PADLADLDRVFRVLAFDRDSGPNSELHYSIKSGKGKSKFKIDNTTGMVYAQKGFEPGQEY
ELNIKATDGGNTSKSSICKVSVHVISVPLKSKHPPVILKPPQAVKLTEGDEIGFLVALIE
AHDKDNDTLWYDIVGGDPGNDFYIGKETGNILLAQKLDYEAQNEYSLNISVSDSVHTVYT
QLNVSVIDINDHRPEFSESTYKVEISEAVPVNTEILRLRATDKDDDSKLIYSLYSARNLI
SLQTFKVDSITGVIYLTDNLDRESLDEHILTVMVRDGGTPAKRNYARVRIIVHDHNDHVP
HFSEQILVGKVYESAVVGSAVLRAFAVDHDKGENARITYSIVSGNFGNVFAIDPELGIIS
VARELDMTANSEYMLRIKAVDHGQPALFSSVPAHIMLTMADNAPPRFTRKEIAAEIYEDQ
PLGSYVAHLSVRSTSSLQFEIIDGNTDGAFLISPSTGVITTQKYLDYEVNRFYNLTVITT
NMASASATCNVIIHILDKNDNVPRFLQANYSGTISEAAPISSLILTNTSEPLVIKAFDAD
SEMNALLHYDIIDILPRRYFQIDSTTGAIRTIRLLDHETYDKFTFHVQVSDLGNPKLTSE
TTARVDIVVTDVNDCPPKFSQSVYNVTLLLPTYKNVAVIQVNATDPDSSESTKLRFDIIE
GNKLGIFGIDSSSGLITVLQPDNMKHFYKLHVRVSDGKFSSVAKVMIRVEESDNSGLVFQ
KPLYEGSIIENSTKITTVCVVNVLGSALNEYLEFKILNPTKMFTIGLTSGVIRTTGIKFD
REVQDKYELIIEARSHYSDREKPRVAHVIVKVTILDVNDNCPMFVNLPYYAVVSVDDVKG
SIIAKVHAIDLDSAENGEVRYELIKGHGELFKVQRESGDIEIKQNLEGHNREYELLIAAY
DKGNIVKGNELEEFALDFNTGVISVVDELDFEQQPQYELLIRATDSVSGVYAEVPVSIVL
QDVNDCPPEFTQENYNVSISEAAQFGTPVLTVIANDNDTGINKKISYSIQNDSSNSSEYF
YIDENEGVVYLKQALDHEEASSHHFIVVAKDLGVPSLSSTAHVWLTVLDMNDNPPKFEQT
SYSCGLLINANRDQFVTIVKASDPDEVDQNSLRYTIVAGNEQQTFSMNPETGIITLTNLA
NFGNENTMILNVSVSDGVYTNFARLKVELLPANLHEPKFDKFIVDVQVPENQPSGFPVTV
VKATDEDFGEFGTITYSIHSELLSEIFKIDKTSGKLTTKVRLDREKQKLYEVLIMATDGG
GKSGFITVRIKVADENDNAPYFLLKEYQTSIHYNYSLNVLFLRVKAVDPDEGPAAQIRYQ
IYEKKSSEVVEIFQINPETGDLSLKKDTTSWIGEVFQFFVRATDKGPQEKHSDVPVNILI
MGPKDYPPVFERKDEKYFLSENSPAGTIITKLKMASNVSATYQIISELDEKPQFEIDNQG
QVILAKPLDFETQDSHLIGILALSDSSPPMTALAEVALKVLDENDHAPQFESSPYIIYLA
ENTEEGTSILKVVAHDEDQGANSEVRYSFSHDLGDMMNIFAIDSHTGWISTLVKLDKEAK
MEYKFYVTATDNGTPKHSARTTVIVRLKDYNDSPTLFKKRFYESSVNEDALPGTVLLTLD
TVDADSDLTTPVEFYIISGDPSSQFQIRQTGEIYVAKGLDREKVPHYDLQVLVTDGMFTD
VTNVSVNILDANDNPPYCLQYRYRQVLSEGILPGSFVLSVLATDNDGPEHSKLRYILSGD
GMDNFLLDKDSGHLKTVTYLDREKQSKYTLTAHVHDKERLSWKCSSQIELIISDLNDNPP
VFSLPFYSVSLPEDVEVGTLVTKIHATDADIGINRKIKYAFIDSFNNHFKMASDSGIVTL
AKPLDREIRAVYNLTVQAVDQGTPQLSSVSTLTVNVQDINDNPPEFANKYYFAVVPEIDA
VGTEVVKVLATSKDTGVNADVTYSIIGGNEHKKFAINNKTGVISIADMLDYERAKDYFLT
IQAVDGGIPPLSNVATVNITVTDCNDNAPVFSQLSYSARIREDAQIGDKILQVIATDLDS
DRNGKVTYSIIRGDDREQFEIDPDSGYVSVAEELDRETTSNYVLEVLARDNGVPVLSRQT
LLNIEISDANDNPPIFAQTNYTTVIQEDKPIGYPIIQFKITDADTAPNTEPYTFDFRSGN
DGNSFRLEEDGVLRTATKFNHKIKDNYLLQIRVFDNGIPPLYSDAWVVVKVIEESQYPPI
ITPLEININSYLDEYPGGVIGKVYANDQDQYDTLTYSLSPTVGIAYPTHELFQINRTDGT
LTALPRLDVGDYRLNVTVTDGKFHTHSIVKINIEVITEEMLENSVAIRFRQVSPEVFVLS
HRKGFVRAVRNAMNCRLKDVIIISVQPSDDDASLRSKRFIVNKDLDVLFTVRKPDEGFFT
SESIKKALNDNFEELEESTKLVVEEIVRFKCSNTYCTFGVCQDHYMLDPGRVDPVATDVT
SFVSPYHRQKLECVCKEGYGGEKCDTIVNECAREPCPPYKNCVPDASTAGYSCQCPEGFA
GAMCDVDISKCHDQNCYIARNPISFSGKSYSQYRIINKKSIEDQLSLSLRIRTVQPTGNL
MYAAGKVDYNILEIVNGAVQYRFELGSGEGIVRESTVYISDGRWHEVKLERDRNSAKITV
DGLHTAQGSAPGISDILNLQSDEMYLGAEVHQHPSILGFEDIQRGFSGCMDDIRISRMSV
PLHKSGDNSVAVLKRFANVEFSCDVNNVLVPPGPCGSQPCMNGGTCHETTAGYECSCHTR
FTGTLCELDMDPCASAPCLNGGKCISTVPGDYSCECLFRLSGKRCEYGKYCSPNPCKHGG
VCEEGDDRALCKCRAFVGDYCEFDLNECESSPCQNGGSCFNDVGSFHCVCPQNTTGPYCG
SQLYSTSITSSIYNITWEELVAIAVGIVLILLLVILFVICRKCYTKRTRRRRNINNENIK
DHIVLNSTRPHEMSEFKRGSKLSNLEVNQREIPVCPPRPVSYTATSQNDALYNCNNTMML
NNLDTLRSYGSAGDELENVPPDYVRNLNRNTGQNCISNHCEPEKTTWAEQMHLASSLNDK
PKVKNDYKISSPVNCDVPNRLYGGRSNTMNYVKSNGSVCPEEDQRSVGSYHWDCSDWARH
SQTLPNITEVPGSEIPDSSSFHSNESNESRCHHLPPVLGPLDPHRDIETLNEDAESEFMA
DSEYDAHGASPSLNALDSGNEEFRFTTADSYIRHPNSYLPSHGYNIPSESEGECLQSPGA
ESDDVEPYGFPSNRNRRKNCDDDIGSVITTLEERNSLLGGYGSNSDLSTNLCEIEDSECE
AEHKPLNYLGGVQQTSV
Download sequence
Identical sequences TC000401

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.