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Domain assignment for TC001405 from Tribolium castaneum 3.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  TC001405
Domain Number 1 Region: 561-990
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.33e-146
Family Reverse transcriptase 0.0000177
Further Details:      
 
Domain Number 2 Region: 1154-1290
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.77e-23
Family Retroviral integrase, catalytic domain 0.0096
Further Details:      
 
Domain Number 3 Region: 312-418
Classification Level Classification E-value
Superfamily Acid proteases 0.00000045
Family Retroviral protease (retropepsin) 0.013
Further Details:      
 
Weak hits

Sequence:  TC001405
Domain Number - Region: 211-248
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0034
Family Retrovirus zinc finger-like domains 0.0081
Further Details:      
 
Domain Number - Region: 266-287
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0942
Family Retrovirus zinc finger-like domains 0.0078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) TC001405
Sequence length 1453
Comment GLEAN_01405
Sequence
MAIQMTQEQFQQLLLQIQGMAAQAAPAPAPGAPRANPRHFTQCVARFDGTRSHAAVEEFI
TAATIFKEVEGIEDAEALAGLPLLLMKEANQWWSGVKNNVDTWDAAMQLIRNAFAPRRPN
YRLFLEIFGEPQPEGMPTDRYVTIQRDRLAQMTRHLDEEWQIDVVYGLLRHKIRDKIPRS
DIGSFNELLNRARAIEENEKESTAGPVKSQKTNGTTTVKANGGKNRARCSFCRAFGHDVG
ECRKLKTNTTSGPPSAPNAIVPRVSTDIRCYGCQRPGVFRRNCPDCNPPSAPVSAPTTDP
TGFCAINTSIQPRRRPTVNIEILGITGTALLDTAAGNSVASISLYQHLLRQGCTPRKEKV
EATLADGGTRLMEVPTVTTNVKLAGKITKTTFIVLSTSEDTKTLLGADFIEDSEVIIDLK
HQQFYFEQNPNEKVAFANDCATPTDEDIRTVFQATKIEFLSPLDPEYIANGYGPPPPDNS
SMIPSVITPGGTWNTYQAPGGADYMLQDANEMLMHYDQDHDEYQTDLFATIPYKTEICSL
ELRPTEGQFLTTTEKHEINRLVKEYRDLFAEFGPPTPYATHRINTGDSLPVAVSPYRLTC
EKRKVLQMEIERLLQQGIIEECDSAWASPVVMVPKANGTIRLCVDYRKLNAVTKPDVYPL
PRLDDLLHATGKIGCITTLDLQAGYWQIQVEPGDRDKTSFICPFGLYRFTRMPFGLRNAP
ASFQRLMDKFKTGIPDVPILAYLDDLIIISPDGHTHIRHLRSTFDQLRRFQLRINRNKCL
IGCSEVRYLGHRISPSGIAPDEKKVEAIKQIPPPRNLKQLQSFLQTCSWFRRFIDQFASV
ARPLSELTKKNASWKWGNAQDEAFTTLKEKLTTAPILRAADPTQPFILRTDSSAYALGAA
LLQGEGPDERPVEYASRLLTSSERNYSTTEREALAIVWAISKFRGYVGENSTTVITDHQA
LRWLMSLKTPTGRLARWALQLQPYNLVIEYTPGKANTIADFLSRPATEESSMICTVQIDL
PARSDADIRNEQLKDPEVKKILDELMSSNPEIAQPWSSRGYVTNRGVLYRYSQADDYEEA
QLVVPHHERLHIMKQHHDSPTGGHYGVDKTYSKIACRYYWPGMRRDVSDYLRTCIACQRY
KASNLKPPGLLQTPVLQQCLEVISIDLFGPLPPSNCGEKWIFIVEDTCTRCALGLFLMTC
AFDMAYLDNGSQFVSAIMQKLTFCLGISQSFTPVYHPEANPVERKNRDLKTQLAIQIGDN
PHSTWPEKLPTIRFAMNTTPCSSTSVTPAFLMFGRELRTIDDVTNDLRHIVESETFVAEA
TPKLLLLSDTWKKARETHEDKQDHRKEAADRTRRTAPEFQPGDLVLVQLHTLSSSAKEFS
SKLAPKRDGPYVILRRHGPTSYEIAAQDQPSQALGTYHSSQLTPYRGLEKEMPPPVVPIR
RRGRPRKHNVQNQ
Download sequence
Identical sequences TC001405

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