SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for TC002411 from Tribolium castaneum 3.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  TC002411
Domain Number 1 Region: 301-556
Classification Level Classification E-value
Superfamily L domain-like 3.91e-43
Family Internalin LRR domain 0.032
Further Details:      
 
Domain Number 2 Region: 179-363
Classification Level Classification E-value
Superfamily L domain-like 1.5e-21
Family Ngr ectodomain-like 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) TC002411
Sequence length 584
Comment GLEAN_02411
Sequence
MSALLLSILGLSVGIPHCPMWKEIAPCTCRMDSTKLTTIHCDKMTSYDQVVRLLKGHFAP
EDRVSLKISFSKLDDLPFRAFNELNISIENLKLNHDGLGRAANRSRDRFFPHIPKCRKSR
ANTFIRKQAGRQRGEGKKGTPRRLRVRRHRSVMVVKNDGIADTTDRFTIDMCYRELAGDT
FDGLNRVVFFSLADNLLGKVPEHLWKRMPGVRTVDLGRTKIKALTGSSFKDLPVQCLVLA
GNSISQMDQDSFPKEVQRLHIGRNNLKTLNKTLTNLSDLIWLFANSNELTDLEGELPLDA
KKLKMIHFSNNKIEKLPQQLKTLTYLESLFFQYNHIQSLDGTLGKARKLVRVVLEHNNIK
TLTKEDFTENEILESLILGHNEITSLNNSLLNLKNLNFLNMTFNHLSEFSFQEIVGLQEL
KSIDLSYNRIKTLIGPATNLVEWNIKLTELKLDHNEIESLDGALSGLPELLRLNLSFNKL
RRISPDDLIGLDQLRLLDVSHNYLTTLEETSKTFLPRLEELRASHNYLTILERDFHGLPV
LCHADLSNNQIVALGRDLVSKTRCKIGHGVHEGTWDTLKIYLQA
Download sequence
Identical sequences TC002411

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]