SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for TC005575 from Tribolium castaneum 3.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  TC005575
Domain Number 1 Region: 348-532
Classification Level Classification E-value
Superfamily NTF2-like 4.58e-50
Family NTF2-like 0.0000401
Further Details:      
 
Domain Number 2 Region: 90-183
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 6.02e-24
Family Non-canonical RBD domain 0.0036
Further Details:      
 
Domain Number 3 Region: 184-337
Classification Level Classification E-value
Superfamily L domain-like 1.73e-23
Family mRNA export factor tap 0.00014
Further Details:      
 
Domain Number 4 Region: 539-607
Classification Level Classification E-value
Superfamily UBA-like 2.27e-21
Family TAP-C domain-like 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) TC005575
Sequence length 607
Comment GLEAN_05575
Sequence
MASKGGKYNKPSWRSQYSEHDFRGGGETRKVSFKSNKYKKDNRNWAAASRAYLEDEDIDM
GASSGGGRNFNRKQFKGRRGGRGDSPVPNHKKRRLLESPFGWYRVTLPFGNKYEKAFVLK
TLLERIQPLPLWPITWSVNGTTATFYMDEFKAAEKLYDLDRQIQMPDGFKLLIKVSHGMP
NVDVNSEMKEKIKLTMAKRYNAANKALDLTKFHADPDLQDNFCVLFKPIIFLTVLEIIAE
NIPEIEAINLFDNKIANLSYLKKTNEKLPHLKILHLGNNKFKDLSMLDPFIGLPIVDIVL
NGNPLCNKYKDQEAYIGEVRKRFPKVMKLDGIDLPPPISFDIQEETHLPPIQQTFLCNQE
GESIVRQFLEQYFLIFDSENRQPLLQAYHESALFSMTMSYPYGHRDKNASWLNWYTTDSR
NLQKVQDPDRRNKLLKQGQVAVVSFLQEMPRSKHDIHSFTVDLVVFTPLMIVLTVTGMFK
ELKSGHKVPPTRAFFRTLVIVPAGSGFCISNETLHITNATDEQAKHIFKTVVSAPPPTPV
ASPVATPAPIDDSTRQQMVTAMAEQSTMNLEWSRRCLEETQWDFTRALSAFADAQKQGLI
PPEAFVK
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Identical sequences D6WXF5
XP_968226.1.52716 TC005575 7070.XP_968226

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