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  Home > Genomes > Tribolium castaneum 3.0 > TC007878

Domain assignment for TC007878 from Tribolium castaneum 3.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  TC007878
Domain Number 1 Region: 980-1098
Classification Level Classification E-value
Superfamily Cadherin-like 5.28e-34
Family Cadherin 0.0009
Further Details:      
 
Domain Number 2 Region: 137-240
Classification Level Classification E-value
Superfamily Cadherin-like 6.41e-30
Family Cadherin 0.00051
Further Details:      
 
Domain Number 3 Region: 237-358
Classification Level Classification E-value
Superfamily Cadherin-like 1.96e-28
Family Cadherin 0.0014
Further Details:      
 
Domain Number 4 Region: 1406-1517
Classification Level Classification E-value
Superfamily Cadherin-like 1.06e-27
Family Cadherin 0.00094
Further Details:      
 
Domain Number 5 Region: 564-677
Classification Level Classification E-value
Superfamily Cadherin-like 1.44e-27
Family Cadherin 0.0015
Further Details:      
 
Domain Number 6 Region: 1722-1833
Classification Level Classification E-value
Superfamily Cadherin-like 5.28e-27
Family Cadherin 0.0029
Further Details:      
 
Domain Number 7 Region: 2281-2498
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 6.73e-27
Family Laminin G-like module 0.017
Further Details:      
 
Domain Number 8 Region: 454-570
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-26
Family Cadherin 0.00066
Further Details:      
 
Domain Number 9 Region: 1510-1611
Classification Level Classification E-value
Superfamily Cadherin-like 1.4e-25
Family Cadherin 0.001
Further Details:      
 
Domain Number 10 Region: 665-760
Classification Level Classification E-value
Superfamily Cadherin-like 2.49e-25
Family Cadherin 0.0016
Further Details:      
 
Domain Number 11 Region: 1295-1422
Classification Level Classification E-value
Superfamily Cadherin-like 2.14e-24
Family Cadherin 0.008
Further Details:      
 
Domain Number 12 Region: 2524-2740
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.77e-24
Family Laminin G-like module 0.0058
Further Details:      
 
Domain Number 13 Region: 1090-1196
Classification Level Classification E-value
Superfamily Cadherin-like 1.57e-23
Family Cadherin 0.0018
Further Details:      
 
Domain Number 14 Region: 348-452
Classification Level Classification E-value
Superfamily Cadherin-like 3.85e-23
Family Cadherin 0.001
Further Details:      
 
Domain Number 15 Region: 1614-1720
Classification Level Classification E-value
Superfamily Cadherin-like 6.85e-23
Family Cadherin 0.00061
Further Details:      
 
Domain Number 16 Region: 38-135
Classification Level Classification E-value
Superfamily Cadherin-like 2.09e-22
Family Cadherin 0.001
Further Details:      
 
Domain Number 17 Region: 1827-1935
Classification Level Classification E-value
Superfamily Cadherin-like 1.26e-21
Family Cadherin 0.0012
Further Details:      
 
Domain Number 18 Region: 1190-1307
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-21
Family Cadherin 0.003
Further Details:      
 
Domain Number 19 Region: 770-876
Classification Level Classification E-value
Superfamily Cadherin-like 3.14e-19
Family Cadherin 0.0016
Further Details:      
 
Domain Number 20 Region: 888-992
Classification Level Classification E-value
Superfamily Cadherin-like 7.99e-17
Family Cadherin 0.0036
Further Details:      
 
Domain Number 21 Region: 2226-2263
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000341
Family EGF-type module 0.01
Further Details:      
 
Domain Number 22 Region: 2186-2224
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000145
Family EGF-type module 0.01
Further Details:      
 
Weak hits

Sequence:  TC007878
Domain Number - Region: 2126-2185
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00151
Family EGF-type module 0.013
Further Details:      
 
Domain Number - Region: 2499-2536
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0391
Family EGF-type module 0.039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) TC007878
Sequence length 3284
Comment GLEAN_07878
Sequence 
MDGFCEIQFGRAIRRMRPWRDFWAVRPPNIQIKVLDKNDSPPSFKDTPLYYSISEDLGPG
QSVATVKADDPDTIGVLEYSLIRGDDGHFVLDKNTGVLTLVDSLDRETKDVYKLTVRASD
GNQHTDTVLTVQITDTNDNPPAFLETAYSFDIPENAQRGHKVGQVKAVDADLGINAQLTY
SVISDWANDVFSLNPQTGVFTLTSRLDYEEVQHYILVVQAQDAGHPALSSTLTVYCNVLD
LNDNTPLFDPMSYTNEIFENVSIATPIVTVSATDLDSGDNGKIVFRITAGDENGDFEMTP
NGTVITKKELDRERQGLYNLVVTATDQAKPPDQRLSSTVQVTIILKDVNDMSPEFVTPNE
TSVAENIAINTVVMAVKAIDKDEGRNGYIEYSLSPDSASSGTFSLGPVDGLLRVSGRIDR
ETKSNYTLSITARDRGDPPRATHTKIFVRILDENDNSPVFDPKQYSASIAENASIGASVL
QVSATDVDDGLNGRVRYSINSGDTNRDFSIAEDTGVVRVAKNLNYERKSRYVLTVRAEDC
AGDVGGEVVRADTAEIVISVSDINDNPPTFLDSPYLAYVMENTIPPNGGYVITVQAYDAD
TPPLNSLVRYFIKEGKPDTFKINASTGEISLLRALDREAQAEYTLSLGAMDTGSPPLTGT
GTVKIIVQDVNDHTPEFKRQSYHATINENSPLSTWVVTPTATDKDIGLNAKIRYSLLGDK
VDRFKIDQDAGIITTSAILDREETEIYYFTVMAQDCSATEPRAAAVNLTITVTDENDNSP
SFSSTKYEVNISDKTKAGEFVFGARASDDDIGINSKISYALTGEHAPNFTINPETGVIKA
AQDLAKLGTKVFNLEIEAADGGKKPRKTSTELRVFLRPDHLFPSFTSPGKTRFVLAENVE
HGKLVARFKATSPKKGAASNVRYAIAGGNIGEALTMDKNTGEVHVAGRGLDYETLPVYEV
WIEAKDSDVPPLRTVLQLTINVTDANDNSPVFNSNLYNASILEEESPPQLVVKVSAEDLD
SGENGQVTYKLTDDFDGTFEIDSESGEIYTNARLDREETPAYELTVEALDQGVPQMTGTA
TVLVTVLDKNDNPPRFSRLFSVNVTENADLGSFVIQVTSSDKDIGDNANATYSFTENPGE
KFKIDPISGNVTVVGHLDREQQDEYLLKVAAVDGAWKAETPLTITIQDQNDNAPEFEHSF
YSFNFPELQRDVVFVGQVAATDRDKQGPNSVISYSLQQPSDLFTVDPASGDIFSKRSLRF
KYTQMEASPENMYSLTILATDNGKPPMSSECLVTVNVVDANNNAPKFDKPEYLSPVPDDA
QEGQLLLKVTAKDKLDFGVNAEINYVIVGGNGSENFAIDKYNGWITLTKPVTEIGQEYLL
RVRAIDKGVPPQHDEVTVTLVVTGENKYMPVFTALSYQVIVPENEPLGSTILTVNASDDD
QGPNGMIRYKISGGNERKEFAVDPYSGAVTILQPLDYDTIQEYHLNITAEDLGFKPQSTT
AMLTITLTDINDNSPTFNQSIYEAYISENLPPNSFVFQVKATDIDSPKNAIIQYSISDGP
DKDMFAIDQKTGRVTAKYSFDYEENDLYTINIVASNPDSPMFGIAELRVHINGVNEYYPR
FIQPVFHFDVSESAEVGTQVGTVQATDQDAGDDGKVYYLFVGSSNDRGFNINSESGVISV
SRSLDRETQSRIVLTIMAKNAGGIRGNDTDEAQVIVEVQDGNDPPEFLQTLYEVEISEGA
PVGSKVTAVKAVDKDVRPQNNQFSYSIIGGNIEQAFKIDPQSGQIETARFLDRETTPEYS
LVVGGIDTGLPPQTGTTTVKIHITDINDNGPTFDPRVVGKVLENEPPNTKIMTLSAKDPD
LPPNGAPFTYKLIGGKHRDFVKIDKHSGVVVTTKMIDREVIPQLEILVEVEDSGSPKMKS
QHVITIEVLDQNDSPSSARSVHVLVYAFNGVFPVGKIADVHPNDPDIVGDYKCKILQAPA
SSGILSIPSGCNLFASKVSPGQGYSLSVSGNDGKHFDVVSTVTVEFVTFSNETVDHSITI
KISNVTSQQFLAQNYRGLLDILKTSLSSGETVLLYGLHDTDDGLELTLAVKSGHNYHNKD
LVVEKLRKKRESIGSLFQTSDVSIGYTPCNENTCQNGGICTAEITVKRNVKITDSQNIVF
TSPVILHEYNCQCADGFAGKNCNKRQDPCQPNPCKSGGQCRRQGFNFHCICPLSKDGKYC
ETERGDACSENPCQNGGSCRQSPDGSSFFCLCRPGYRGNQCEALADSCRPNPCLHGGLCV
SLKPGYKCSCTDGRYGRHCEKSTFGFGELSYMAFPSLDAATNDITFIFSTTKPNSLLVYN
YGLQTGGRSDFVAVELVNGRAVFSFGGSRTAVTSISVGGRNNNLADGSWYKIIATRNGRV
VSLSVASCTEHGDVCEECRPNDNSCYADDIGPAGTLNFNNQLLLIGGLNSADPVLERPGQ
IHSDDLVGCVHSVSVNGRLLNLSHPLHSDGIQNTCIRKGSCRGVTSDPCMGYGTCLDHWS
AVNCDCGNNLIAPNCHGALQPISLSDGAFVEFAISKKHKRMQLLEIFYGGSTLWKPKQPK
ESPSKSVSFLFRTVRTQGVLFYATSNKQYTSVELIDGQIIYMSKLSNSVNMTEPHVRVTD
GQWHNLTLHSHSRVLEILLNGVRIGDELDSEGVHDFLDPYLTYLSLGGAQASLYYARGSV
PLAFEGCITNFTVNNEIQPFNGSGSIFTQVIFKGKVTKDCNGPIGVGAAATTDPLSIGIT
LVIVFFVVLLVAILVSFVVFRLRKQHKEKGGAPGSPSGLHSKQNGSATMMSTNGLNAVND
NILGRSLHSGDNSLGYHSENGDVIRGIGGHSLVGPELLSKKYKERDIIQGELTRPQRPDI
IEREVSKNLPMREEHHPPLPPTSNHNHDHGGNDLNSEIPEHYDLENASSIAPSDIDIVYH
YKGYREAGGVRKYKATPPPVAGYHHKHASGAQGQAQHRHSPHHPTGYPPRAPPVTSPGSR
PHQSTPLARLSPSSEMSAQQPRILTLHDISGKPLQSALLATTSSSGGVGKDVLHSNSERS
LNSPVMSQLSGQSSSSRKAAAPPPVTNSLTAEEIERLNSRPRTSSLVSTLDAVSSSSEAP
RGGVNNHLNHLHHSPVPETHHSSTTTDESGNDSFTCSEIEYDNASLAGDKYKSNEPDSRR
NDSSSGNKNNLPLPSYDGFDSSYRGSMSTLVASDDELEGPMYRPSTGSPSTTGLGWDYLL
NWGPNFESLAGVFKDIAELPDSVNGRVPSSLRLTNAPKPSEEYV
Download sequence
Identical sequences A0A139WJ40
TC007878 7070.D2A2L8

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.