SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for TC011379 from Tribolium castaneum 3.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  TC011379
Domain Number 1 Region: 422-790
Classification Level Classification E-value
Superfamily L domain-like 4.25e-62
Family Internalin LRR domain 0.041
Further Details:      
 
Domain Number 2 Region: 94-401
Classification Level Classification E-value
Superfamily L domain-like 5.61e-55
Family Internalin LRR domain 0.023
Further Details:      
 
Domain Number 3 Region: 682-999,1050-1124
Classification Level Classification E-value
Superfamily L domain-like 2.04e-43
Family Internalin LRR domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) TC011379
Sequence length 1323
Comment GLEAN_11379
Sequence
MKLFWLVTLPFALATPSFIPCSEISRDLRFPCTCSLGPPEPALDNNPAISVNCDRVVFPG
DLPALPFGAPIVSFRQRWAGHQALPTQIFSSTGLPLRSIDLSGNSLRRLTERLLQALQPT
LVELRLSDNLLGDTLNPIFSTSEFRGLNHLQVLDLSGNIIRALEEGIFEGCDNLQELYLE
RNSLTSVPSTSLNGPKSLKMLSLASNRITSLKSAAFEAQPNLETVDLTLNGIGGIEGGAL
SGLKNLKTLKLGHNKLTRFNSDVFQGASNLKNLDLSENFITEFPTIALRAFKDLKYLNLS
SNLVQSLDNNDLLNLVGLYYLDLSRNNIANIAPGTFLGLKQLRKLDISVNSLRTIEDDAF
EGLDNLEHLNLKDNNILLIPASALGRLPKLSSLQLDYNRVAALSGDILRSIAEKVTSLVL
AKNVIRELPPASFQHFQHLSHLDLTRNLLTTLNSDAFVGLETTLKELHLPQNKISTITGP
TLSLLKLETLDLSDNHLTELSRNVFGMLPQLRFLNLSHNSHLASIPSNLLHKLPNLEVFD
LSYTGLRILTGDFFAKSSKLRRVYLHNNAISELGDGVFANLPNLTSIDLSSNHINNIKQG
AFVNIMNLKELVLRGNQLSSFKGEFFNTGTSLELLDISHNQLSYLFPSSFRIHPRLKILK
ASNNKFNFFPAELIATLQFLQVVDLSHNDLKTVEELDFARLPRLRVLLLRNNKLEFVSEM
AFHNSTQLQVIDLSYNKLERLAERIFEGLVRLELLNLEGNLLSDLPETIFERARLQMLEN
INLRGNLFEVAPLKSLQRQYFFVSSVDLSRNKLREIPGDDSSMVNIKKLDLSFNPLSDET
IRNVLGEPKTMRELNLAGTGIRELTQLETPFLSYLNLSYNNITSLNATIFERTSLLEVLD
VSNNQISDISNYSNLWPLLKNLQTLDLSSNPIRSISSSDFNGLTSLKQLSITSLLQCEKI
EKGAFKSLKNLSILKAFEFPKLGYIDLKGLLSHLPSLEHVTIETKDAAVGADQLQPLLQP
RLKTLKLKGGRLRSLSSGTLSGIKGGEVTIGIMNTSITSLPPSLFFPVPRSSKITLDVTG
NHITTLTPQILATLDDRRGDLKIVGLETNPIVCDCGARALRRWLPSHMTSLRCSAPDHLH
GRLLVEIADDDLTCDARKVTTPTSPLPRSASSTRLHTKVTEPEIIWSVPVTEMVKTPKPV
TSSNLNNDDTLIIGIVGGVVAFIAILIIIICIIRLRMGGSQYRGGPPVVGPLAGSSCACS
VKGAPVYTMGPGYGPGYAATLPHKMQAPIRASNYSTMGRVPYYGNSGQPYFIALPPDENK
IYR
Download sequence
Identical sequences D6X4B6
TC011379 XP_008198761.1.52716

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]