SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000000052 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000000052
Domain Number 1 Region: 274-426
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.7e-49
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.000000733
Further Details:      
 
Domain Number 2 Region: 429-586
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 2.41e-42
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.00000544
Further Details:      
 
Domain Number 3 Region: 35-139
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 7.59e-34
Family Spermadhesin, CUB domain 0.00027
Further Details:      
 
Domain Number 4 Region: 641-809
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.75e-32
Family MAM domain 0.0068
Further Details:      
 
Domain Number 5 Region: 144-262
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.7e-29
Family Spermadhesin, CUB domain 0.00000605
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000000052   Gene: ENSTNIG00000007974   Transcript: ENSTNIT00000002788
Sequence length 919
Comment pep:known_by_projection chromosome:TETRAODON8:15:1345955:1364773:1 gene:ENSTNIG00000007974 transcript:ENSTNIT00000002788 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRAGWLLFLLGQVLAAASLALTDKCGGEIEIHDADYLTSPGYPGAYPPSQQCVWVITAPE
PGQKILINFNPHFDLEDRDCKYDYVEVYNGGDERAPMLGKFCGKIAPSPIISTGGQLLIK
FVSDYETHGAGFSVRYEVFKTGPECSTNFTAPRGVIKTPGFPEKYPNNLECTFMIFAPQM
SEILLEFQSFDMESDPTPPSGAVCRYDWLEIWDGFPAVGPHIGRYCGLASPGRVTSYTGI
LSMTITTDNAIAREGFSASYTIRERSLPHEDQEFICMEPLGMESGQISAQQIKASSQYNS
NWSPERSRLNYHENGWTPSDDTVREWIQVDLGFLRFVTAIGTQGAISKETKKHYFVRSYR
VDVSSTGEDWVTVKDNSKQKIFQGNHNPTDVAVAFLPKQTLARYVRIRPLTWEQGICMRF
EIYGCRTSDYPCSGMLGMVSGQISDAQISVSSSADRGWVAENARLLTGRTGWTGQQAKQP
FRNEWIQVDLGQEKMLSGVMIQGGKHRDKNVFVKKFRVGHSLDGEDWAMVREDNGTRPKI
FSGNQNHDTPELRLVAAVRTRFVRIYPDRATAEGLGLRLELTGCDLDAPTAVPTTPAVTD
CEDGHLGCGGETEAPYDYDATTGGAAVTEPNLDFIPAAYIWFACNFDFSSYCGWTAEPGK
GATWLIHPGGASAGHRGPTFNHTGGRGNFVYVQLSKREPPGGTGEDEDGDKVARLASVPI
PAPDSHLCMSFWYHMLGEHAGALHVNLRTEAEGTQVLWTVRGHQGSQWKEGRVLLPPAKV
SYQVILEGVADKRSPAHIAVDNIQIMDGLADDECTDPRAPTPPPSFVPPMDSLSQDTSEL
SGPGNMLKTLDPILITIIAMSALGVVLGAVCGVVLYCACSQGSMSDRNLSALENYNFELV
DGVKLKKDKMNGQTNYSEA
Download sequence
Identical sequences H3BVP0
ENSTNIP00000000052

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]