SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000001072 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000001072
Domain Number 1 Region: 2-167
Classification Level Classification E-value
Superfamily RUN domain-like 2.09e-32
Family RUN domain 0.0019
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000001072
Domain Number - Region: 660-678,825-877
Classification Level Classification E-value
Superfamily Multiheme cytochromes 0.00156
Family Cytochrome c3-like 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000001072   Gene: ENSTNIG00000015561   Transcript: ENSTNIT00000002183
Sequence length 893
Comment pep:known_by_projection chromosome:TETRAODON8:1:16662748:16673499:-1 gene:ENSTNIG00000015561 transcript:ENSTNIT00000002183 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
SRREHWKLLSSLKTTVEGLVSTTNPNVWSRYGGLQRLHKDMNHILSNGLRNEQVYYKQRD
YWPFVWCVRYISPHLASHVEQFSHLEPVRSGGMKVAGESYKAERWLLHSLQVHMLSAQLR
PLLRHLEHTRKYYNDDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDTVGLSPLKSSPVL
GLLKSQSLCVLPGAGGAWRSADSAVRGEALNRRLTMSNCSLREAVCTGHDSGDATGAGSH
SRIGTTPTSPAGCLGDPWVCVDNPGENERGVTPPLGPTSVPCISFTECSPHHSSQPDPGD
SGEGDYDDGPEYLAIGNLGSRRLSRSSTHSSDHSEPRDQSQQQGSRILPPNRRSSFSEGQ
KGPGRGVRGHARSFSDTGISTKLGRSEGHRKITIIIEDPVADGSPGSGVSDGMFRKPSEG
QSLISYLSEQDFGSCADLEKRSAENAHFSISESLIAAIELMKYNLQHQEEEGDSDSEIQQ
LKQKIRLRRQQIRRSRMLPPATSQHILHSTDSGDSRRSSQESCQGLSDSGSVEEVEECEL
QDADIKRRASASSRSFLSSESVSKSFLQSNSAESVAMGLLRQFEGMQLPAASELDWLPEH
DAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPRPQIIFNIHPAPKRKIVVAK
QNLPCAGCGTRIDPDYIRRLRYCEYLGRYFCQCCHENAQAVVPGRVLRKWDFSKYYVSNF
ARDLLSKIAGDPLFNLSDINSGLYKKVKGLEAVRVLRTQLCHMKNLFKTCRFSKEVLDKF
DILPGHLTEDLHLFSLNDLNAVRNGDLAPRMKELLKLGTMHVAGCVLCQAKGFVCEFCGN
EKDIVFPFQLHKCQRCQECHACYHRSCFRAGKDCPRCQRLAERRKRMARKNME
Download sequence
Identical sequences H3BYK6
ENSTNIP00000000952 ENSTNIP00000001072 99883.ENSTNIP00000001072

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]