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  Home > Genomes > Tetraodon nigroviridis 76_8 > ENSTNIP00000003225

Domain assignment for ENSTNIP00000003225 from Tetraodon nigroviridis 76_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000003225
Domain Number 1 Region: 1861-2107
Classification Level Classification E-value
Superfamily Ankyrin repeat 2.78e-54
Family Ankyrin repeat 0.0000000622
Further Details:      
 
Domain Number 2 Region: 434-565
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000165
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 3 Region: 850-986
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000392
Family Growth factor receptor domain 0.0096
Further Details:      
 
Domain Number 4 Region: 283-451
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000643
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 5 Region: 622-751
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000235
Family Growth factor receptor domain 0.016
Further Details:      
 
Domain Number 6 Region: 1109-1223
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000022
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 7 Region: 748-788
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000367
Family EGF-type module 0.0041
Further Details:      
 
Domain Number 8 Region: 171-211
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000104
Family EGF-type module 0.0064
Further Details:      
 
Domain Number 9 Region: 978-1020
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000123
Family EGF-type module 0.0096
Further Details:      
 
Domain Number 10 Region: 199-324
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000148
Family Growth factor receptor domain 0.0095
Further Details:      
 
Domain Number 11 Region: 594-636
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000261
Family EGF-type module 0.015
Further Details:      
 
Domain Number 12 Region: 559-601
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000732
Family EGF-type module 0.0065
Further Details:      
 
Domain Number 13 Region: 1015-1052
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000176
Family EGF-type module 0.0038
Further Details:      
 
Domain Number 14 Region: 785-822
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000214
Family EGF-type module 0.0068
Further Details:      
 
Domain Number 15 Region: 136-180
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000239
Family EGF-type module 0.0093
Further Details:      
 
Domain Number 16 Region: 1232-1275
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000911
Family EGF-type module 0.015
Further Details:      
 
Domain Number 17 Region: 98-134
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000134
Family EGF-type module 0.028
Further Details:      
 
Domain Number 18 Region: 825-862
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000151
Family EGF-type module 0.014
Further Details:      
 
Domain Number 19 Region: 1388-1425
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000174
Family EGF-type module 0.015
Further Details:      
 
Domain Number 20 Region: 1306-1350
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000495
Family EGF-type module 0.012
Further Details:      
 
Domain Number 21 Region: 1054-1096
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000515
Family EGF-type module 0.021
Further Details:      
 
Domain Number 22 Region: 1527-1559
Classification Level Classification E-value
Superfamily Notch domain 0.000000222
Family Notch domain 0.0037
Further Details:      
 
Domain Number 23 Region: 1447-1478
Classification Level Classification E-value
Superfamily Notch domain 0.00000034
Family Notch domain 0.00046
Further Details:      
 
Domain Number 24 Region: 1487-1520
Classification Level Classification E-value
Superfamily Notch domain 0.000000353
Family Notch domain 0.0054
Further Details:      
 
Domain Number 25 Region: 55-94
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000839
Family EGF-type module 0.011
Further Details:      
 
Domain Number 26 Region: 1265-1309
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000148
Family EGF-type module 0.0082
Further Details:      
 
Domain Number 27 Region: 1348-1385
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000224
Family EGF-type module 0.019
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000003225
Domain Number - Region: 21-53
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000699
Family EGF-type module 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000003225   Gene: ENSTNIG00000007203   Transcript: ENSTNIT00000002659
Sequence length 2470
Comment pep:known_by_projection chromosome:TETRAODON8:4:7162495:7185745:1 gene:ENSTNIG00000007203 transcript:ENSTNIT00000002659 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
SNRFNYQYRYYTCCLKCSLPTESCLNGGRCEANANGNGECRCPSDFVGNRCQYPSPCSPS
PCRNGGECRAVSHGNTFDFRCVCRLGFTDRLCLTPTNHACMSSPCRNGGTCELITLTAYR
CRCPPGWSGKTCQIANPCASNPCANGGQCSAFDSTYICTCPPAFHGQTCKQDVNECAQTP
SPCLNGGVCVNEVGSYHCRCPSEYTGQHCETAYMPCSPSPCQNGGTCIQKGDTTFNCICL
PGFTGEHCEHNIDDCPGHSCQNGGVCVDGVNTYNCQCPPHYTGQYCTENVDECELMPNAC
QNGGTCHDTHGSYHCVCVNGWMGDDCSENIDDCASAACYHGATCHDRVASFFCECPHGRT
GLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECSLGANPCEHG
GRCINTKGSFQCKCLQGYEGPRCEMDVNECMSNPCHNDATCLDQIGGFHCICMPGYEGVF
CHINIDECASQPCLNNGKCVDKINSFHCECPKGFSGNLCQVDIDECASTPCKNGAKCTDG
PNKYTCECAEGYTGQHCEIDINECYSDPCHYGTCKDGLASFTCFCRPGYTGRLCETNINE
CLSQPCKNGGTCQDRENTYVCICPKGTAGFNCEVNLDDCKSKPCDYGRCIDKINGYECAC
EPGYTGAMCNININDCAINPCHNGGTCVDGINSFTCLCPEGYNDATCLSQVDECRSNPCI
HGRCQDLINGYKCACDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCRVGFTGP
NCQTNINECASNPCLNQGTCIDDVAGYKCNCLLENIGENCETLLAPCSPRPCKNGGVCKE
AEDYQSFSCICPEGWQGQTCEIDINECVKNPCHNAAVCHNTMGGYQCQCQPGYTGLKCEI
DTDDCKPNPCSNGGLCLDGVNSFTCTCPPGFRGGRCEQDINECESNPCKNGANCTDCVNS
YTCTCPLGFSGINCEINTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTGSYCQYDINECD
SKPCLNGGTCLDSYGTYKCTCPLGYTGVNCQNLVRWCDSSPCKNGGSCWQQGASYTCQCQ
TGWTGLYCDIPSVSCEVAAKQQGIDVAHLCRNSGQCLDAGSTHYCRCQAGYTGSYCQEQV
DECSPNPCQNGATCTDYLGGYSCECVPGYHGINCSKEINECQSQPCQNGGTCIDLVNTYK
CSCPRGTQGPSEGVHCEINLDDCTPFTDPLTNEPKCFNNGKCVDRIGGYQCMCLPGYVGE
RCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNGGTC
AVASNTPHGFICKCPPGFTGSSCEYNSRSCGALNCRNGGTCVSGHLGPRCLCPATFTGPE
CQTPTDSLCISNPCYNGGTCQITPDVPFFRCSCPSNFNGLLCHILDYSFVGGFGRDITPP
PEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYFND
GKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLDCA
NNMPEKLADGHLVLVVHIPPEQLKNRSSAFLRELSSVLHTNVVFRRDAKGEPMVFPYYGN
EQDLVKHNVLKRSADGWPDWASMPADVLGQRKRRELDPLQVKGSVVYLEIDNRQCYQQST
ECFQSATDVAAFLGALASSGNLNVPYIEAVTRLSNGVRPTSPGSELYPMYIVFLGLAALG
FICLGVLVSRKRKREHGQLWFPEGFKVSEPSKKKRREPLGEDSVGLRPMKNSDINLMDDN
QIEWDDEDPDCRRLRLEEQAMLDLCDHGDPRKWTQQHLDAADLRIACIAPTPPQGEIEND
CMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSAEIITDFIYQGANLHNQTDRTGE
TALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHSAVAADAQGVFQILIRNRATDLD
ARMHDGTTPLILAARLAVDGMVEELINCHADVNATDDSGKSALHWASAVNNVEAAVVLLK
NGANKDMQDNKEETPLFLAAREGSYQTAKVLLEHFANREITDHLDQLPRDIAQERMHHDI
VRLLDEYNVVRSPGLHNAPLNTSSLSPPLASPNDYLSNLKPSMSVKKVRKLTSGGKGGKD
GGKDGRNKKKKSVDGKGNLLDTSAVLSPVESLESPHGYLSDVASPPMASPFQQSPPISLN
HLQGTGDLLGMNAGKDVGCMSFDPNPPRLSHLPVSSPHSQGAASLGGSRGGQCDWVSRMH
PGVSQQGNFTQAPTMTHNIMSALHGVTTATLSQIMGYQNLQTSHLGSPAHMIQQAHSQQL
QHQNTNSNPAAGPPLNQSCPNIELNGSEMQQSNSSGHVMTIHTVMPQETQILGTQFLTPP
SQHSYSGPMDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSIHS
QVNLIPDQFK
Download sequence
Identical sequences H3C4Q6
ENSTNIP00000003225

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.