SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000005323 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000005323
Domain Number 1 Region: 176-270
Classification Level Classification E-value
Superfamily NSFL1 (p97 ATPase) cofactor p47, SEP domain 3.66e-31
Family NSFL1 (p97 ATPase) cofactor p47, SEP domain 0.00000967
Further Details:      
 
Domain Number 2 Region: 256-372
Classification Level Classification E-value
Superfamily Ubiquitin-like 2.07e-30
Family UBX domain 0.0000218
Further Details:      
 
Domain Number 3 Region: 3-45
Classification Level Classification E-value
Superfamily UBA-like 0.000000000222
Family TAP-C domain-like 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000005323   Gene: ENSTNIG00000002762   Transcript: ENSTNIT00000005469
Sequence length 374
Comment pep:known_by_projection chromosome:TETRAODON8:Un_random:54385120:54388840:-1 gene:ENSTNIG00000002762 transcript:ENSTNIT00000005469 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASQEQSVREFVAVTGVDEERARFFLESAGWSLHLALGSFFEDEGDEDIVTLPQPESGSS
GSWSGGPSSSQPRVTSFRDLMHEAKEESDEEEGQSRFFAGGSERSGQQIVGPPKKKSSNE
VVEDLFKGAREHGAVPLDRSGKGPSDSRKPHAFFGGGYRLGTAPEESAYVAGERQASSTQ
QDVHVVLKLWKTGFSLDNGDLRNYNDPGNAGFLEAIRRGEIPLELREQSRGGQVNLDMED
HRDEDFVKPRVSFKAFGGEGQKLGSATPELTSPAASTHNQTANEAEARTSVTLDPSQPLT
NIQIRLADGTKLIQKFNHTHRVSDLRLFVVAARPSMAAADFVLMTTFPNQELSDESQTLQ
QANLLNAVIVQRLK
Download sequence
Identical sequences H3CAQ1
ENSTNIP00000005323 ENSTNIP00000005323 99883.ENSTNIP00000005323

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]