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Domain assignment for ENSTNIP00000006180 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000006180
Domain Number 1 Region: 250-386
Classification Level Classification E-value
Superfamily Cadherin-like 3.28e-28
Family Cadherin 0.00015
Further Details:      
 
Domain Number 2 Region: 475-602
Classification Level Classification E-value
Superfamily Cadherin-like 5e-23
Family Cadherin 0.00039
Further Details:      
 
Domain Number 3 Region: 368-480
Classification Level Classification E-value
Superfamily Cadherin-like 2.36e-20
Family Cadherin 0.0000822
Further Details:      
 
Domain Number 4 Region: 160-254
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000000537
Family Cadherin 0.00011
Further Details:      
 
Domain Number 5 Region: 27-173
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000283
Family Cadherin 0.0034
Further Details:      
 
Domain Number 6 Region: 588-687
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000654
Family Cadherin 0.00033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000006180   Gene: ENSTNIG00000003590   Transcript: ENSTNIT00000006328
Sequence length 878
Comment pep:novel chromosome:TETRAODON8:Un_random:28823886:28835071:-1 gene:ENSTNIG00000003590 transcript:ENSTNIT00000006328 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LEPWAMFVFILLILLGVSTLVTPEEQTCVPGFKQSTFILKVTSKHLRQQVSLGKVNFEDC
TDRTRFSFSSSDGRVRAQADGALTVKRPITLHEGHLDFLIHIWDSRGRKHTLPVRLLHQE
RQQPPKDLPEAGMEAQVPVVYFHKSGEGLKRRKRDMVIPPLNVPENHRGPYPLKISQIRS
NKDDTTRIYYSISGPGANQPPVNLFTMDRVSGTLFVTQQLDREQQASYMLKAYAVAEGSG
TAEEPMDIIVNVIDQNDNKPAFVKDTFLGEVPEASPTNFEVIQVNATDLDEPNSYNSDIR
YKILSQEPKLPSDNLFTINPTTGVIRVNAGGLDREKYPEYTLEVQAADLEGIGLTGVAKV
ILTVTDSNDNAPAFTQASYETSVAENKADSQILRMLVTDGDEPHSAAWNAKFTIVSGDPG
GFFSVKTGTNKQEGILSTAKGLDFEKNSKHTLLIAVENEVPFAVALPTATATVVVTVQDV
NEAPIFDPPEKQVSKGEDLPVGTDVVQYTASDPDTARKQKVMYRILNDPAGWLNVDKETG
VIKVKTSMDRESLFVKDNKYTALIGAYDDDEVPATGTGTLMVLLEDVNDNAPVIEERAFQ
VCRNKPAPQLLSVTDKDGPGNGAPFSVSLQDPSRSNWTARMNDSIETGIILQLTKALESG
QYTVVLRVADNRGRDQDNTVQATVCECTGEDNQCQERVAAGTNLPVILGVLAGILLLLML
VLLLLMFARRRRGPQKEPLLQDTDTRDNIFYYDEEGGGEDDQDYDLSVLHRGLDNRPEVF
RNDVMPNFMPAPQYQPRPANPEEIGNFIDNNLKTADNDPTAPPYDSLLVFDYEGGGSDSG
SLSSLNSSSSGDQDYDCLSQWGPRFKKLADMYGGGEDD
Download sequence
Identical sequences H3CD57
ENSTNIP00000006180

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