SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000008202 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000008202
Domain Number 1 Region: 1532-1644
Classification Level Classification E-value
Superfamily C-type lectin-like 3.06e-47
Family Noncollagenous (NC1) domain of collagen IV 0.00000184
Further Details:      
 
Domain Number 2 Region: 1420-1529
Classification Level Classification E-value
Superfamily C-type lectin-like 9.89e-44
Family Noncollagenous (NC1) domain of collagen IV 0.0000012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000008202   Gene: ENSTNIG00000005505   Transcript: ENSTNIT00000008368
Sequence length 1645
Comment pep:known_by_projection chromosome:TETRAODON8:Un_random:17379896:17394670:-1 gene:ENSTNIG00000005505 transcript:ENSTNIT00000008368 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CDCSGVKGSKGERGFPGLTGPPGLPGFPGPEGQVGPRGEKGSDGPSGPVGPKGIRGPPGL
PGFPGTPGLPGLPGQDGPPGPRGVPGCNGTKGERGLPGNSGFPGPSGLQGPPGLPGQKGD
PGEVITTDRFGSKGAVGLPGLQGYPGPPGEAGLQGPVGPPGPQGYAGPPGPPGPPGPKGN
MGLNFQGPKGQKGDPGPPGPRGDPGYPGPPVSTFLLTLDEFRGGQKGEKGEPGEAGKRGK
PGKDGDPGSSGFPVSSASDILGPKGEVGLPGPPGRDGERGQKGDRGYPGPPGVVIGSPTG
IRAGPKGEQGYPGGPGVKGERGPPGLTGPPGAPGLPAIGGGGQPGTPGFPGERGQKGDPG
APGLTLPGPPGPPGSPGFPGPQGPPGPPGYSSGQACVAGEPGRPGVQGERGYPGETGRKA
VPGEKGDTCVNCFGGTAGIPGPPGPPGPSGFPGSPGVKGSKGESGFPGSPGAVGPPGAPG
IQGAPGFTGEKGDPGDAITVSGLRGEKGDTGFPGPPGLPGLDGRPGRDGQPGLPGQKGAP
GSLQVKGERGLPGEPGGRGIPGDRGSPGPPGFGPPGPTGEKGVQGVSGRPGGPGVPGKAG
AKGEPGLSVAEKGQQGPRGQDGEPGLSGPPGNPGQPGQPGFPGLPGSKGEPGLPGIGLPG
PPGSKGFPGIPGQPGAPAGPGRPGVDGRPGAPGIPGPKGEPGFGLPGPPGIPGVPGPKGL
PGPKGDPGFPGGPGSPGRSGFDGGPGLKGEPGIPGIPGARGPPGPPVIGSLGQPGLPGPP
GPLGPPGFPGANGAKGDPGPPGLDIPGLPGDRGAPGFPGSPGPAGIPGPPGGPGRDGVPG
GPGQKGDPGPIGPPGPSGGPGGPGLPGGPGPKGEPGFPGRDGGPGSPGGKGERGDPGLQG
LPGTSLQSVIKGVKGEPGLPGPAETLLRAPGGPGQKGISGLPGDPGLPGSDGRPGLPGPP
GAKGDPGFPGGPGGPGAPGPKGSMGEMGLPGPTGQKGLPGQPGRSGSPGQPGAPGFNGAK
GEPGSAGVGPPGPPGLKGEPGQPGFPGSPGLKGNPGSPGLPGLPGGPGAKGDPGLPGFQG
APGTPGPKGQDGGPGGPGISGAPGRPGESGRPGAPGSPGEKGQAGRDGIPGPAGVKGEPG
LPGYGGPGSPGIPGSPGAKGDPGLPGPSGAQGFPGSKGEAGFPGPPGPPGSSGPPGSPGL
ALQGPKGLQGPPGLLGRPVSAYKGAPGPEGPRGPPGSGGVKGEKGIPGAPGQPGFPGQKG
DLGSSGIPKGSPGLPGAPGLKGDIGLPGVSGFPGQSETNRTALRKGPKGDPGLPGASGLP
GDPGDAGPAAPIVVKGERGPPGVPGSPGGRGPPGPPGRQPGEPGNPGLEGPPGFGGPPGR
KGDLGPAGQPVPGQRGYPGPPGSDGPQGLPGLPGSVAAAHGFLITRHSQAQDVPYCPDGT
NLIYDGYSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLS
TPEPMPMSMAPITGESIKPFISRCAVCEAPAMVIAVHSQTIQIPTCPANWEALWIGYSFM
MHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYGNSYSFWLATVEPSEMFRK
PQSETLKAGNLQTRVSRCVVCMKRT
Download sequence
Identical sequences H3CIX4
ENSTNIP00000008202 ENSTNIP00000008201 99883.ENSTNIP00000008202

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]