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Domain assignment for ENSTNIP00000008260 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000008260
Domain Number 1 Region: 101-388
Classification Level Classification E-value
Superfamily ARM repeat 5.42e-28
Family Plakophilin 1 helical region 0.067
Further Details:      
 
Domain Number 2 Region: 394-468
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.00000000000000223
Family SAM (sterile alpha motif) domain 0.013
Further Details:      
 
Domain Number 3 Region: 538-676
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 0.000000000000301
Family Toll/Interleukin receptor TIR domain 0.0062
Further Details:      
 
Domain Number 4 Region: 471-529
Classification Level Classification E-value
Superfamily SAM/Pointed domain 0.00000389
Family SAM (sterile alpha motif) domain 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000008260   Gene: ENSTNIG00000005561   Transcript: ENSTNIT00000008426
Sequence length 709
Comment pep:known_by_projection chromosome:TETRAODON8:10:10550219:10556752:-1 gene:ENSTNIG00000005561 transcript:ENSTNIT00000008426 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
HKGVKGPSAAHRRIWIGGFGGGGGGGGLWVGPRGPRPVSPGIAADIQARLDASIPALRGA
IRKLRTGKENGRSEEIRTAIAEIFQLVEEAWVLPTVGRQVAEEICNRIRLEGGLELLLQL
QQMPEVEITYESAKLLEQILVSENRDYLARMGLGVILNLSRQQEDAQLARSVSGILEHMF
KHTEETSVHLISNGALDALLFWCRGTDPTVLRHCAVALANCAMYGGHRCQRWMIEKQAAE
WLFPLAFSKEDEIIRFHACLAVTVLATNREIEPEVVKSGTLELVEPFIASLDPDDFLRSL
LDSADCMQGKTASDLQHFLPLLDGARVEGKCIAAFYLCVEASIKSRQRNTKIFQEIGAVQ
SLKRIVMYSSNGTASGLAKRALSMMGEEVPKRILPCVPNWKTCEVQTWLQQVGFSAFCNR
FQELQVDGDLLLSITDQDLSADLGMTAALTRKRFLRDLRVLKTYANYSTCDPHNMADWLA
EVDPRFRQYTYGLVQSGVNHHNVQSLTEQQLQHDCQITNGVHRAKILSCSRRPLKPSHTD
AQPAGPDVFISYRRTTGSQLASLLKVHLQVRGYSVFIDVEKLEAGKFEDKLIQSVQRARN
FILVLSSGALDKCMGDAAMKDWVHKEIVTALNGKKNIVPVTDNFSWPDPTSLPEDMRAIL
NFNGVKWSHEYQEATIEKILRFLKGHHDQMDSPGTSKVCPGPAVALGPL
Download sequence
Identical sequences H3CJ31
ENSTNIP00000008260

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