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  Home > Genomes > Tetraodon nigroviridis 76_8 > ENSTNIP00000009917

Domain assignment for ENSTNIP00000009917 from Tetraodon nigroviridis 76_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000009917
Domain Number 1 Region: 196-317
Classification Level Classification E-value
Superfamily Cadherin-like 1.57e-32
Family Cadherin 0.0022
Further Details:      
 
Domain Number 2 Region: 1048-1165
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-31
Family Cadherin 0.00095
Further Details:      
 
Domain Number 3 Region: 2111-2235
Classification Level Classification E-value
Superfamily Cadherin-like 1.44e-30
Family Cadherin 0.00082
Further Details:      
 
Domain Number 4 Region: 1807-1912
Classification Level Classification E-value
Superfamily Cadherin-like 2.09e-30
Family Cadherin 0.00049
Further Details:      
 
Domain Number 5 Region: 1597-1701
Classification Level Classification E-value
Superfamily Cadherin-like 2.86e-30
Family Cadherin 0.00034
Further Details:      
 
Domain Number 6 Region: 419-522
Classification Level Classification E-value
Superfamily Cadherin-like 2.22e-28
Family Cadherin 0.00098
Further Details:      
 
Domain Number 7 Region: 1703-1813
Classification Level Classification E-value
Superfamily Cadherin-like 7e-28
Family Cadherin 0.00051
Further Details:      
 
Domain Number 8 Region: 2543-2649
Classification Level Classification E-value
Superfamily Cadherin-like 9.14e-28
Family Cadherin 0.0016
Further Details:      
 
Domain Number 9 Region: 1493-1596
Classification Level Classification E-value
Superfamily Cadherin-like 9.95e-26
Family Cadherin 0.0013
Further Details:      
 
Domain Number 10 Region: 625-749
Classification Level Classification E-value
Superfamily Cadherin-like 5.63e-23
Family Cadherin 0.0027
Further Details:      
 
Domain Number 11 Region: 2316-2419
Classification Level Classification E-value
Superfamily Cadherin-like 5.85e-23
Family Cadherin 0.0019
Further Details:      
 
Domain Number 12 Region: 522-629
Classification Level Classification E-value
Superfamily Cadherin-like 2.28e-22
Family Cadherin 0.0015
Further Details:      
 
Domain Number 13 Region: 833-939
Classification Level Classification E-value
Superfamily Cadherin-like 3.14e-22
Family Cadherin 0.0018
Further Details:      
 
Domain Number 14 Region: 1157-1264
Classification Level Classification E-value
Superfamily Cadherin-like 1.41e-21
Family Cadherin 0.0028
Further Details:      
 
Domain Number 15 Region: 1907-2015
Classification Level Classification E-value
Superfamily Cadherin-like 3.85e-21
Family Cadherin 0.0024
Further Details:      
 
Domain Number 16 Region: 2427-2549
Classification Level Classification E-value
Superfamily Cadherin-like 4.32e-21
Family Cadherin 0.0033
Further Details:      
 
Domain Number 17 Region: 2221-2320
Classification Level Classification E-value
Superfamily Cadherin-like 8.11e-21
Family Cadherin 0.0023
Further Details:      
 
Domain Number 18 Region: 2651-2760
Classification Level Classification E-value
Superfamily Cadherin-like 1.24e-20
Family Cadherin 0.0024
Further Details:      
 
Domain Number 19 Region: 1373-1499
Classification Level Classification E-value
Superfamily Cadherin-like 1.96e-19
Family Cadherin 0.0033
Further Details:      
 
Domain Number 20 Region: 740-845
Classification Level Classification E-value
Superfamily Cadherin-like 2.09e-19
Family Cadherin 0.0055
Further Details:      
 
Domain Number 21 Region: 88-200
Classification Level Classification E-value
Superfamily Cadherin-like 4.85e-19
Family Cadherin 0.0027
Further Details:      
 
Domain Number 22 Region: 2019-2123
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-16
Family Cadherin 0.0019
Further Details:      
 
Domain Number 23 Region: 2758-2868
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000000214
Family Cadherin 0.0043
Further Details:      
 
Domain Number 24 Region: 1288-1385
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000000814
Family Cadherin 0.0059
Further Details:      
 
Domain Number 25 Region: 308-416
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000137
Family Cadherin 0.0035
Further Details:      
 
Domain Number 26 Region: 950-1060
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000842
Family Cadherin 0.0069
Further Details:      
 
Domain Number 27 Region: 37-95
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000141
Family Cadherin 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000009917   Gene: ENSTNIG00000007115   Transcript: ENSTNIT00000010095
Sequence length 3199
Comment pep:known_by_projection chromosome:TETRAODON8:18:8909306:8926265:1 gene:ENSTNIG00000007115 transcript:ENSTNIT00000010095 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
NLTLSVKEGLPAGTIVGDLGAVLSAPSTGFFISESRDSDVFRDLEIDADTGLISTAVVLD
RESRRQYDFVAATPTGEMIKVRIEVKDVNDHSPVFPSEGLNLEISEVSPPGSRFKLEGAK
DEDEDEFGTQGYRIRESEMEERFHLDHHRSGSGQHLSLDLVLMSRLDREEQDFYSLTIEA
FDGGVPPRTGTLQLRIHVLDENDNPPVFNQTEYHASVPEDAPLMSPVCQVHATDLDLGDN
GRITYEINRRQSDPDRVFSINRTSGVVYVNKPLDYEAQAFHELIVSATDNGAQPEHSSTF
VGVRVLNINDHSPSISVLFLSETGDAAVSEAAGLGDFVARISVSDPDFQEERVAVTLEGD
DGKFTLKQTADFLYALYVSADLDREEKDLYELKVRASDLGSPPLSSEVVFLLRVTDANDC
HPQFEKDAYTVSVPEDVPQGSSLIQLQARDADEGPNGAVRYSILRSNQDRLVSIEPESGL
VATAAPLDRESLEQLWFLVVAADGGEPSLSSTATVTVQVLDVNDNEPVFQRQLYGASVPE
HSAVGSCFLQVVATDADSPAFGTLLYSLSDGFDGQDQHPLFHVHPQSGELCVSQDIDRDS
GQTVHDLLIRAEDPGGLSAQTYVHVEVEDLNDNAPVFNPDEYTVSISGHAQPGAEVLNVI
ATDRDSGRFGQVTYGIIPGDMSSLFDVDPQTGTLTLTSPLTDLGAASLQLLLTAQDGEGV
MSAKPAVVTVHVLHSARAPAVFHQSRYTFTVAEDATPGTTVGTVEAVTPAGFSASVSYRI
SSGDPQGFFSIHPRSGVISSTKPLDHELQPNVLLVIQSYSDASPVYSTTQVNIAVTDVND
NAPVFLRASDAVSVSQNVLPGTVLYIAHAHDADSGSNGRVRYRLRNDRFGTFGIDRNLGT
VTLIQSLLGSRQQSYHLEVVAEDGGEPAQSSGLSLSVSVDRSAAEDSLAFETLVYQVEIG
EGYRKDSRVIQVRAHRGRGSRLSSSGLAYALETEAGFPPAPFRIHPKSGWLFAHSLDYET
QSAFRFRVLASAAEPSLANTTATAAVTVSVLDVNDNAPVFSRDLYYFTVSEAPSPQGLVG
TVSAADKDSGRNAQLSYILLSDGKFFRINAKTGEIINWVALNREHHSQHTLKVMVTDQGH
PRLNATATVHILVTDTNDNTPQFMHLPASKEVNVQIWAEIPAGSLVANMFAKDLDAGENG
TVTFSLASEDEGEPPHFEIDGETGNIRTTEHFTRNTRPFYTLTVCASDGGAPPLEHVAVV
HVQVFPCPCVFQVHGSEAVDGRAEHPLVRRFTVREDAELATVIGSARVPDEGRFRYSISE
GDGSVQFGIDASSGDIYVNQPLDYEAAAQYVLVVRAEGAGLAPGANASVLVSVMVEDAND
HTPWFPDKMVLLGLSEDATVGSLAFAFQARDADGTFPNSAVRYGLTYDPKVTDSSTRFPF
QMNPYTGSLTVTAPLDRETTSSFAFTVTATDQARRKEERKQATVAAQVFLLDVNDNRPVF
ISAVSVQVMEDAEVGSLLHRFVAKDGDEGENGLVSYTILTGNKKGMFTLEGNTGLLFLAS
ALDYESQRLHRLIVEAVDHGLPSLSSTQTFTVEVADVNDQPPVFSQSVYNASVAENKDPG
EPVARVSATDGDSEENAVVWYSLLPGPGYELFSINPDTGLITTASYLDREQQHGFTLRVQ
ARDSGPRPLSATATVLCSVLDDNDNPPAFMQSSFRISLPENLPPGAIHTAQASDPDLGEN
GTILYSIVGEDCAGCFTVNSRSGVVSTTKVLDREEKQNYTLTIQARDYGPTPLSSSTQLQ
LVLLDRNDNAPSFSRKSYQASVSEGLPPGAEVLRVSAFDPDEGPNGRVTYSLTEDSSQGA
FSVDSLTGVIRTTGPLDRESRAQYTLRAVATDGCTQGPLTSVASVTVQVEDVNDNVPICD
QNPVNAWVSARTLPNQIVATVTAEDSDQGENGTIQFALSDEENLFDINRETGEISVRRRV
RAGFSGRKLEVMVSDRGRPVLTSTCLVFIHLKGENEGLQFTNKVYNATIKENSGAGILVT
KVEASGEAGSRQSVVYTIFSGNENSLFSINHHTGEIRVQKDYALDFELSPHIHLVVLADN
GLQTTHCRVSIHLLDVNDNAPRFERSSYRTAVWEGQAHNTYVMQMFASDADSGINGQIEY
SIVSGDPNEAFILDSVRGILATSIPLDREITPSYKLVLQAADQGDPPLSSTATVRVQVVD
VNDNSPAIPHMEPVVIAENRPAGHTVTQVTANDVDLSSTIRYSLSGNSSLGSPFAINQYT
GVVSLTRALDYEEQAEYTLTVLASDSLHQTSGEVKVQVLDLNDNAPVFSEDSYQVDLSEL
ATADTLVLSVSATDRDSGPNGEITYRLLSSPLQGFYIQADSGAIFTNKPIKATANGNLIH
LLVEAKDGGDPALSSVASVDVQILDTNDHVPTFHQEVYSLTIPEDTPTDATLLTLSAEDQ
DWSPANTHLDYAITQGNEERRFCLEVRLVPIENQWRNVGKLVLCNALDRETTDSYVLTVS
VSDRGDPPLNSSAVVMLTVADRNDNAPVFSSTEYHAQVSESSPRGTRLVQVSARDPDLGA
NSLVRFDIISGNSKGHYKLDPESGLLAVNQSLDYEQDPKYILTVRASDGGEFSEKHQVAF
AVVFITVLDENDNSPHFVFSTVNCSVLENLPAFTHTCSVHAVDNDLGSYGQLTYSILSPC
FLDYDSGSPEKKEAFAIDPLTGDVHTRQTFDYERESEYCFVVEARDKGGKTATVRVQVSI
RGVDEFSPIFTQKQYHFLLPGHSKPGDVVGFVMAMDHDRGVDGIVGYSLVSSSPFFSVNK
TTGSVFVSEPVYRRRGSHGEDLVKLLVSAGSPKLSSRTTTCVVFINISSSAEALAGAPLD
AHMLSLGVSLVVILAVLLVFVGLVLRYKMKEAALKKAAAIAANLNPGAGSFSRSSSQNQS
IITLQEIKRPSIVVVKRELSNPYGQSDSSGRGSAEGETAEDQEIKWIIDYPCRRGGDPVL
GEQEAESPHWVPPRADISSQPVGAAPERLPEKRLSSEMASTESLHHFKEEGGGEGLLPPL
PAIADSLSSLARRDEQLQGSYGWDHILDWEPRFQAMASVFTDIGMLPDRELQVGRGDSAA
EASSLMHPPPLITAVAQPGIRSVPPRRPGLVRSLSRRRSSRKYAYSPLARDTGLTPTAMT
PSFSPSLSSLTVRTPNASP
Download sequence
Identical sequences H3CNT4
ENSTNIP00000009917 99883.ENSTNIP00000009917 ENSTNIP00000009917

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.