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  Home > Genomes > Tetraodon nigroviridis 76_8 > ENSTNIP00000012830

Domain assignment for ENSTNIP00000012830 from Tetraodon nigroviridis 76_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000012830
Domain Number 1 Region: 1654-1782
Classification Level Classification E-value
Superfamily Cadherin-like 8.42e-35
Family Cadherin 0.0011
Further Details:      
 
Domain Number 2 Region: 1860-1984
Classification Level Classification E-value
Superfamily Cadherin-like 3.14e-30
Family Cadherin 0.00061
Further Details:      
 
Domain Number 3 Region: 2603-2712
Classification Level Classification E-value
Superfamily Cadherin-like 1.7e-29
Family Cadherin 0.00059
Further Details:      
 
Domain Number 4 Region: 225-345
Classification Level Classification E-value
Superfamily Cadherin-like 3e-29
Family Cadherin 0.0015
Further Details:      
 
Domain Number 5 Region: 1762-1872
Classification Level Classification E-value
Superfamily Cadherin-like 9.28e-29
Family Cadherin 0.0012
Further Details:      
 
Domain Number 6 Region: 442-553
Classification Level Classification E-value
Superfamily Cadherin-like 1.28e-28
Family Cadherin 0.001
Further Details:      
 
Domain Number 7 Region: 2172-2288
Classification Level Classification E-value
Superfamily Cadherin-like 1.86e-27
Family Cadherin 0.0017
Further Details:      
 
Domain Number 8 Region: 2375-2484
Classification Level Classification E-value
Superfamily Cadherin-like 2.88e-27
Family Cadherin 0.0012
Further Details:      
 
Domain Number 9 Region: 1066-1207
Classification Level Classification E-value
Superfamily Cadherin-like 2.09e-26
Family Cadherin 0.0017
Further Details:      
 
Domain Number 10 Region: 554-660
Classification Level Classification E-value
Superfamily Cadherin-like 1.31e-24
Family Cadherin 0.0011
Further Details:      
 
Domain Number 11 Region: 866-1007
Classification Level Classification E-value
Superfamily Cadherin-like 2.75e-24
Family Cadherin 0.0032
Further Details:      
 
Domain Number 12 Region: 1415-1541
Classification Level Classification E-value
Superfamily Cadherin-like 5.57e-24
Family Cadherin 0.00093
Further Details:      
 
Domain Number 13 Region: 1191-1299
Classification Level Classification E-value
Superfamily Cadherin-like 6.54e-23
Family Cadherin 0.0024
Further Details:      
 
Domain Number 14 Region: 2705-2808
Classification Level Classification E-value
Superfamily Cadherin-like 6.81e-22
Family Cadherin 0.0041
Further Details:      
 
Domain Number 15 Region: 2485-2601
Classification Level Classification E-value
Superfamily Cadherin-like 8.71e-22
Family Cadherin 0.0019
Further Details:      
 
Domain Number 16 Region: 1531-1658
Classification Level Classification E-value
Superfamily Cadherin-like 1.71e-21
Family Cadherin 0.0024
Further Details:      
 
Domain Number 17 Region: 656-760
Classification Level Classification E-value
Superfamily Cadherin-like 2.71e-20
Family Cadherin 0.001
Further Details:      
 
Domain Number 18 Region: 770-878
Classification Level Classification E-value
Superfamily Cadherin-like 2.86e-20
Family Cadherin 0.007
Further Details:      
 
Domain Number 19 Region: 1965-2086
Classification Level Classification E-value
Superfamily Cadherin-like 4e-19
Family Cadherin 0.0032
Further Details:      
 
Domain Number 20 Region: 118-229
Classification Level Classification E-value
Superfamily Cadherin-like 8.71e-19
Family Cadherin 0.0025
Further Details:      
 
Domain Number 21 Region: 338-446
Classification Level Classification E-value
Superfamily Cadherin-like 3.28e-18
Family Cadherin 0.0041
Further Details:      
 
Domain Number 22 Region: 2281-2379
Classification Level Classification E-value
Superfamily Cadherin-like 2.57e-16
Family Cadherin 0.002
Further Details:      
 
Domain Number 23 Region: 2805-2875
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000657
Family Cadherin 0.0025
Further Details:      
 
Domain Number 24 Region: 1351-1427
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000671
Family Cadherin 0.0052
Further Details:      
 
Domain Number 25 Region: 987-1070
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000361
Family Cadherin 0.0037
Further Details:      
 
Domain Number 26 Region: 2089-2182
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000971
Family Cadherin 0.0033
Further Details:      
 
Domain Number 27 Region: 52-125
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000275
Family Cadherin 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000012830   Gene: ENSTNIG00000009938   Transcript: ENSTNIT00000013022
Sequence length 3263
Comment pep:known_by_projection chromosome:TETRAODON8:7:3572452:3621693:-1 gene:ENSTNIG00000009938 transcript:ENSTNIT00000013022 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
TNAVLLGTAVLIQFLSLSLFSQSTTVLGVLELQLDEGQPAGTIVGDISAGLPSGATPSLY
FISDHEGTGVGSDLNIDETTGIITTARSLDREKRDHYSFIAVTMTGVTIEVSITVNDIND
HAPEFPKKKAVLKVPEHTAIGTRFSLEPATDADKDQLTTQGYTIREGNVGQVFRLETKRA
ANKVLYLDLVISELLDREKRSSYTLVIEAFDGGSPKRIGSMTLEVTVTDINDHAPVFNQS
RYHAIISESLSQGSSILQVFATDEDEGDNGLVLYEINRRQSDPDRYFVMDVKSGVITLNR
PLDYELKRVHELVVQARDNASHPEVTNAFVTIHVRDYNDNQPTMTIIFLSEDGSPRISEG
AQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSIIYLIYVDQELDREERDSY
DLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQTIPEVVHPGSFVLQVTARD
KDQGPNGDVRYRLLKSKNSHSDWFLIDPVTGIITTATALDFESEPAPSVTVIAMDNGRPP
LSSTVKVDIVLQDVNDNTPVFSSNFYNASIKENTPAGTCFLEVSATDEDRGSFGAVTYAL
GSPSGNTPPDQFTIDKGSGQLCTSTPLDRDEGADKFDLTVTATDGGGLSSVARVRVSVVD
INDNRPAFYPVLYTVSLSTHSSPGTSVVKVTANDPDSGLNGRVTYRTVPGGGSAFFTLNK
DTGVISLSRSLHGKANTVISMEIAAEDGGGLTAPVNARVNVSVVGGSVTSPVFEQAQYFF
TVPEDVLRGTSLGVVRASAKTGEGGSKDILYSISSGDPYGYFTVDSSTGTIRTALPLDHE
TCSSLELEIQARYGFPPAYGTTRVRITISDINDNAPAFLPSSSESLLLPEITKMGTVIYT
IQATDRDSGHNGQLSFDLVSAGAAGSSGQRTFGVDRGSGEVRLIGSLSYESVPRYDLQVV
AKDGGAPQLSSTFTLVVHIQAQDARGPNFDTLTYRVELRENTPLNTQFLQLRPDGDAAGF
GIMSDSGWIFVRSSLDREVKDMYLLTVLASSGPGGAGRTGSATVRVTVTDENDNSPRLSQ
ERVFLAVRENLLAGTGFGRVSAIDRDAGLNARLTYKLLHTDRHFQINSQTAVRNLLNYVL
FKPNLLCLSSTSGEISTRLALDREHQSSYQLVVVVQDGGTPPRSATGTAHITVLDENDNA
PTFSHTRPDRELLLQVVEGLPSGTVLGTVTAKDPDEGENGTVHYSLSGARAERFTLNPMT
GELKAASPLRWAERSEYTFMVTAADHGSPGLSSTCRLQIQQIVEMKVRDGSGERPLACTR
FPLTMNAVEGAPPGSIIGSVRSQNHQQSSSTEGQVTYLVVGGSDRDGTFMVDRLKGDVYL
VRELDYEKGSRYTLHIEVSDFSQAFPSSHLVQLEINVQDRNDHAPHFTEDPVTIVIPENT
EPGASVYTFQAIDKDGSGPNSELIYSIEHYWPETHLLSLDPVSGVLTLGQKLDRESTPSL
FLVVRATDQTVDPSQRRWGSVTARMFVTDENDNTPVFSSPSAVSVMEDQPVGFVILYVMA
RDEDEGENGRVSYRIQAGNTAGRFSLNPNTDDMVRLIFQGFLLGLLSLICLRWKYRSLSI
LKALDREEQEVFNLTIVAEDHGIPQLSTSQVLSVRVIDVNDEAPVFQRAEFEALVIENKG
PGTTVLKVTAVDRDQGSNGHVTYGGVTEEGFVINPVTGVITTTKELDTEAQDHYTLTVYA
RDGGLPPNFAKALVRVEVQDVNDNAPVFARPWYRLEVPENQAPVELCSLKATDPDSGPGG
ELEYRVTAGDPDGDFHLHPSTGALSTSRGLDRETKAEYTLEVVASDRGSPALSTTVMVQV
QVMDVNDNSPIFSKSSYSVDVSEDAAEGSRVLEVSAVDADDALNGKFLYFLSQDAHGAFT
VDENTGVITTSAALDREKWAAYTFQVFAVDLSPAEPRNTSAQVTVTVLDVNDNAPVFIQD
PLVIEVSIRHSQRVLATMKAEDKDFGANGSVFYRFATPVKGFSINSLTGEIQATEPLQDL
TQAQRTLIVEAMDQGSPAQSAQGVVVIYVKEVVYNGIRFSRNARDVSIQYLKNAGTAVAQ
AQAQHPDGTQKGISYSLFSGNRKKAFIINSSTGEIMVQSSKGLDFEDTPRLRLVVKAESV
SSTSFMAINLILQDVNDNLPRFQLQNYIAYMREAQGYDMPIIQVVAEDVDQGQNGQVTYS
IQSSGMSGLFKINPVTGSITTAAIMDREIFTQTKLVVTATDRGSPRLAGSATLTVIIVDQ
NDNSPTIPLPQEVRIPENMLIGTEITLVTGNDVDSSPALSYSLQLDPTALGMFGIHRYSG
GISLTAPLDFEEKTWYTVTVRATDSQHQTEANITILIEDINDNAPTFTHDLYQVTLPEHT
PPGSTVVTVTATDRDSGENGKITYSVMSSTQDGFYIDPNNGTLFINHRAEFDPERPSVSI
VIEARDNGSPPLSSLTTVQVQISDVNDNAPVFHQSEYRATISEDTIPGSTVLTFEAFDSD
LSRENCGFDFAIANGNDGNAFQIESSVRYLEGRGFQTVGTLLLAEYLDFETKSFYNLTVV
VSDRGVPQRSSSVAAVVTIGDVNDNPPLFGRAEYSVSLSEGAAAGTEIIRLTATDPDSTP
NAEVQYTISSGDEVNLFTIDQWSGALRLQRALDREHQSTHTVIIQATDGQGHFALAPVVV
EVKDVNDNHPFFPVEVLTASIRENQPANSAVTVLHAIDHDTGVFGHLKYFMLERTGTGKE
SFSVDPNSGEIRSKIPFDFEKINSFNFVAMAIDSGNHSATVTVQVFVTGEDEYDPVFLSQ
DFSFEVPEGAKKGQSIGQVQANDEDGGVDGIVLYSFPTGSPYFDVNKTTGVIYLKLDSSS
SSSSSSSSSSSGSGRTKREARLMTLDVKAQSPLDASRTTTAQVTIDVTNTNFGLAPDVNV
LLISIIAASLGFVVLLVVMAVVVFLVKSHRKKKGQEAANRNTASGTALQKLDERNPGAGG
ERIYHQALPGYAGDQGGPGGGAYTRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRARGP
DSGIQQDADQLSDISCEPAALEGSSWFKGKKLGGSLSGTLLSGQLPVYRDEGGGYLGDGK
PSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKDETAQQSQNPRQP
FQPKPKMDPKPRIDPPPLITSVAHPGAMSVPPKVPVIGRTFPHLSTLRRSPISHEGSISS
AAMSPSFSPSLSPLAARSPAVSP
Download sequence
Identical sequences H3CX45
ENSTNIP00000012830 ENSTNIP00000012830 99883.ENSTNIP00000012830

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.