SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000015765 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSTNIP00000015765
Domain Number - Region: 42-129
Classification Level Classification E-value
Superfamily Tropomyosin 0.0981
Family Tropomyosin 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000015765   Gene: ENSTNIG00000012792   Transcript: ENSTNIT00000015974
Sequence length 745
Comment pep:known_by_projection chromosome:TETRAODON8:2:7584958:7588841:1 gene:ENSTNIG00000012792 transcript:ENSTNIT00000015974 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDFSKFLDDDFDVKDWVNGAFKVVQKEAPGKADTHAATLVMKLQLFIQEVNNAIEETSNQ
ALQNMPKVLRDVESLKQEASFLKDQMVLVKEDIRKFEQDTVQSMQVLVEIDKVKSRMQLA
AEALQEADKWSTLSADIEETFKTQDLALISSKLTSMQSSLAMLVDTPDYSEKCVHLEALK
NRLEALASPQIVGTFNSMSTDRAKLFVKIFTEIDRMPQLLAYYYKCHKGQLVSIWQDLSQ
GDLSLNQQLSEFYDTLLSTWHCQLQWTSQVFKNPYEVVTVLLIQTLGAMVPSVPVCLNTA
VERAAQEQRLDTLLELHHVTFTFGHSLETAMLPHLGENNLLKVNELVCALYDPYKSYQLR
YGELQEAHLLIQISAVPLEHGEVIDCVEEMSHSVGKLFGLASAVDRCVKLTDGLAVCGLL
KALKALFTKQCNYFALFLDLFCVAFCRIISTCGELLRQCGAFEQQLSERILSRAGKYLSE
SYSPRSLAGIQEASSTERKSTTKPWQEYNYLQRGNMAEYNSLMEVLYSLKEKGTGNSSLL
AEPRSALTRLNQQANQLAFDSVFLQIKHQLCLVSKMEKHEAPGLGESYTEDLPTFSLSPQ
EYITNIGQYLMSLPLHLEPFVTQEDPALEMALHAGKLPFPPEQGDELPELDNVADYWLGI
ARATMQTYCDAILLIPQLSTRSTKQLATDIDYLSNVMDALGLQPSRTLQHIVTLLRAKPE
DYRQAAKLLPRRLASTIAGLRSIDY
Download sequence
Identical sequences H3D5H6
ENSTNIP00000015765 99883.ENSTNIP00000015765 ENSTNIP00000015765

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]