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  Home > Genomes > Tetraodon nigroviridis 76_8 > ENSTNIP00000016460

Domain assignment for ENSTNIP00000016460 from Tetraodon nigroviridis 76_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000016460
Domain Number 1 Region: 1958-2177
Classification Level Classification E-value
Superfamily Fibrinogen C-terminal domain-like 6.93e-82
Family Fibrinogen C-terminal domain-like 0.000003
Further Details:      
 
Domain Number 2 Region: 870-1033
Classification Level Classification E-value
Superfamily Fibronectin type III 4.28e-24
Family Fibronectin type III 0.00027
Further Details:      
 
Domain Number 3 Region: 1786-1952
Classification Level Classification E-value
Superfamily Fibronectin type III 1.78e-20
Family Fibronectin type III 0.00098
Further Details:      
 
Domain Number 4 Region: 1695-1783
Classification Level Classification E-value
Superfamily Fibronectin type III 4.76e-19
Family Fibronectin type III 0.0000997
Further Details:      
 
Domain Number 5 Region: 687-865
Classification Level Classification E-value
Superfamily Fibronectin type III 1.25e-18
Family Fibronectin type III 0.0006
Further Details:      
 
Domain Number 6 Region: 1139-1227
Classification Level Classification E-value
Superfamily Fibronectin type III 2.16e-16
Family Fibronectin type III 0.0023
Further Details:      
 
Domain Number 7 Region: 594-682
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000011
Family Fibronectin type III 0.001
Further Details:      
 
Domain Number 8 Region: 1233-1393
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000194
Family Fibronectin type III 0.0014
Further Details:      
 
Domain Number 9 Region: 1608-1694
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000441
Family Fibronectin type III 0.0021
Further Details:      
 
Domain Number 10 Region: 1502-1603
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000683
Family Fibronectin type III 0.0022
Further Details:      
 
Domain Number 11 Region: 1058-1134
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000211
Family Fibronectin type III 0.0026
Further Details:      
 
Domain Number 12 Region: 1418-1500
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000261
Family Fibronectin type III 0.0046
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000016460
Domain Number - Region: 414-439
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00199
Family EGF-type module 0.041
Further Details:      
 
Domain Number - Region: 475-500
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00272
Family EGF-type module 0.034
Further Details:      
 
Domain Number - Region: 537-561
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00324
Family EGF-type module 0.065
Further Details:      
 
Domain Number - Region: 353-376
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00607
Family Integrin beta EGF-like domains 0.057
Further Details:      
 
Domain Number - Region: 291-315
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00712
Family EGF-type module 0.043
Further Details:      
 
Domain Number - Region: 569-592
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00827
Family Integrin beta EGF-like domains 0.079
Further Details:      
 
Domain Number - Region: 383-407
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0157
Family EGF-type module 0.026
Further Details:      
 
Domain Number - Region: 322-345
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0199
Family EGF-type module 0.052
Further Details:      
 
Domain Number - Region: 229-253
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0209
Family Integrin beta EGF-like domains 0.083
Further Details:      
 
Domain Number - Region: 198-222
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0283
Family EGF-type module 0.022
Further Details:      
 
Domain Number - Region: 507-530
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0408
Family EGF-type module 0.037
Further Details:      
 
Domain Number - Region: 260-283
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0544
Family Integrin beta EGF-like domains 0.073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000016460   Gene: ENSTNIG00000013465   Transcript: ENSTNIT00000016673
Sequence length 2186
Comment pep:known_by_projection chromosome:TETRAODON8:4:4833708:4845943:1 gene:ENSTNIG00000013465 transcript:ENSTNIT00000016673 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MAAKGLLGCLLLLALLSVSKAGLVGKILRHRRQTLAAPEEFNTSVPSAGQPVVFNHVYNI
NVPASSLCSVSLDSPDSALLEAQEGTGHQSTEHTVDGDNQIIFTHRINIPRQACGCSDDL
LGLRDLLSRLEMLEGEVSALKDQCNGERMCCGSQVTGEVAFTPYCNGHGNYSSETCSCTC
EPGWRGANCTELDCPGDCQGRGRCVNGTCQCLEGFGGENCTVEECPVGCGTNGRCVAGTC
VCSSGFFGGDCSQTECLNNCWRRGRCEGQVCVCDQPWTGADCSELLCPKDCLSRGRCENG
TCYCDEGYAGEDCGQRTCPGKCHGNGFCVDGRCVCIAGFSGEDCSQLNCLNDCNGRGSCF
NGLCICEAGYQGEDCSQLACLNNCNSRGQCINGQCSCDVGFYGEDCAELSCPNSCFNRGR
CVNGQCVCEEGYAGEDCRVATCPSNCYGRGKCSEGRCACHTGFTGECSKLSCPNSCQNRG
RCVNGQCVCNEGFAGEDCSRKACPNDCLARGHCHDGKCVCQDGYTGVDCSALSCPANCNH
RGRCVNGRCACESGFEGESCEERSCLNGCRGNGRCLSGQCLCDEGYVGEDCSGAVSPPTD
LVVSEVTSDTVDLLWRNQMLVTEYLVTYAPTRAGGLLQEFTVSGDKTAATVHELEPGLEY
IINVYAILSNKRSVPISARVATDFPRPEGVIFKSVSETSVEVRWDQLDIPFDGWEIFFRN
TFVSPQKEENGHIKTTVPSSQNQFVQSGLGPGQEYEIAINMVRNNTRGPQTTRTVTTKID
APQQVEVKDVTDTSALVSWSQPVASVHRITMFYGLISDPSDTNSVEIFPPDKQYSVDGLR
PDTEYKVTLISRRGDSTSDPVSTSFITALDAPTNLQITSQTDQSITVQWTNSKANVSSYL
VKYSPISGDGHGEELFPRQPGYSTKAALTGLRPGTEYGIGVTAVKNEAESLPATTNAETE
IDPPRNVEDVESSETSLTLRWQKPQAKISTYRLVYVSRDGQVEEELIPASATSYVMSNLT
PGMSYSVTLTAERGPRRSRPVSHSASTDAELTLGNLTFTSTIISLTWSAPDLEFESFLME
VRASSGVTHGHMTLPGKAREAEIVGLTPSTQYNITVQGLVEGRRSLPLNIFATTAEELQP
AVTNLTVSDRTWDGFTVSWTPAGGDFDSFVLEITNLENLEESQNLTLSGGALSLAVSGLN
PNTSYVVGLFGVYQDSVLEPVYTEATTVGLPAVGKLYITNLTSDSFSILWNSSHGEFDGF
VLEIIDSNWLMEPKEYNLSHLVRSYDITGLRPSTDYVAFLYGTYKSSRTSAVSTVASTAE
APDLSGLVVSNVTSDRFSLSWQTGEKHFDHFIIELRESTLPSQAMGRVVPGDGRSVVMSG
LKAGTSYDIKLYGSAGGQNTQALFDLTTTEDVPQLGLLTTSSVGPHDVSLTWATLSGHFD
AFVVRISDPEQQFDTQEYTLQRGARNFTVSDLVDATPYDFELYGISHDRRTPSVFAHAVT
APLPRVENMTVSQVTPHGFRVSWEVNQHLRQEDLAPSSGHFRHFHIVVTDSGWLLEPQEF
SVPGNQTHLDVTGLITGIGYEVRLTGVSESGLLSRPLTTVAVTVAEPEVEHLFVSDITDG
GFRLSWTSDEDMFDRFVVKIRDGKRLGHPREYAVRGDERTMVVTGLMSGAEYEIELYGVA
LDKRSQPVFGVAHTGLSTPKGLYFSDVTDSSAVVHWSTPRSAVDSYRVTYVPFEGGSPLT
VTVDGGVFEALLANMIPGRKYQVTVSSVKGLEESDPSMDTVTTALDRPRTLTALNVTDTS
ALLLWQPCAAAVDGYVVTYSAEAVPPVVEHVSGSTVEFEMGSLAPGTRYKVGVHAVKEAL
KSNPAITEFTTDVDPPRDLKAINIQTDGATLTWKPPQAAVTGYTLTFTAGGVIREVVLSP
TASSYTMAQLAGSTEYNIRLQAIAGAQRSRHVDAVFMTNGQLFARPRDCAQIRLNGEAVS
GLFSIYVGGEENQPLQVWCDMTTDGGGWMVFLRRQSGKLDFFRNWKNYTAGFGNMNDEFW
LGLSNLHKITSSGLYELRVDLRDSGESAFAQYDKFVVAEPRTRYKLYIGAYSGTAGDSMT
YHQGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDKSHSKGINWFHWRGH
EHSIEFAEMKLRPADFQRPESRRKRS
Download sequence
Identical sequences H3D7G9
ENSTNIP00000016460 99883.ENSTNIP00000016460 ENSTNIP00000016460

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.