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  Home > Genomes > Tetraodon nigroviridis 76_8 > ENSTNIP00000019370

Domain assignment for ENSTNIP00000019370 from Tetraodon nigroviridis 76_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000019370
Domain Number 1 Region: 1614-1741
Classification Level Classification E-value
Superfamily Cadherin-like 1.03e-35
Family Cadherin 0.0011
Further Details:      
 
Domain Number 2 Region: 2337-2461
Classification Level Classification E-value
Superfamily Cadherin-like 2.71e-34
Family Cadherin 0.0011
Further Details:      
 
Domain Number 3 Region: 189-309
Classification Level Classification E-value
Superfamily Cadherin-like 2.09e-32
Family Cadherin 0.00085
Further Details:      
 
Domain Number 4 Region: 1820-1944
Classification Level Classification E-value
Superfamily Cadherin-like 3.14e-32
Family Cadherin 0.00093
Further Details:      
 
Domain Number 5 Region: 406-521
Classification Level Classification E-value
Superfamily Cadherin-like 7.59e-31
Family Cadherin 0.0011
Further Details:      
 
Domain Number 6 Region: 1044-1173
Classification Level Classification E-value
Superfamily Cadherin-like 6.85e-29
Family Cadherin 0.0013
Further Details:      
 
Domain Number 7 Region: 2132-2252
Classification Level Classification E-value
Superfamily Cadherin-like 1.21e-28
Family Cadherin 0.0022
Further Details:      
 
Domain Number 8 Region: 1722-1832
Classification Level Classification E-value
Superfamily Cadherin-like 2.86e-27
Family Cadherin 0.0013
Further Details:      
 
Domain Number 9 Region: 2563-2672
Classification Level Classification E-value
Superfamily Cadherin-like 3.4e-26
Family Cadherin 0.0013
Further Details:      
 
Domain Number 10 Region: 828-938
Classification Level Classification E-value
Superfamily Cadherin-like 2.28e-24
Family Cadherin 0.0028
Further Details:      
 
Domain Number 11 Region: 1374-1500
Classification Level Classification E-value
Superfamily Cadherin-like 5.37e-24
Family Cadherin 0.0014
Further Details:      
 
Domain Number 12 Region: 1491-1619
Classification Level Classification E-value
Superfamily Cadherin-like 1.83e-23
Family Cadherin 0.0045
Further Details:      
 
Domain Number 13 Region: 518-624
Classification Level Classification E-value
Superfamily Cadherin-like 8.38e-23
Family Cadherin 0.00065
Further Details:      
 
Domain Number 14 Region: 1165-1270
Classification Level Classification E-value
Superfamily Cadherin-like 1.1e-21
Family Cadherin 0.0037
Further Details:      
 
Domain Number 15 Region: 2665-2768
Classification Level Classification E-value
Superfamily Cadherin-like 3.8e-21
Family Cadherin 0.0016
Further Details:      
 
Domain Number 16 Region: 734-846
Classification Level Classification E-value
Superfamily Cadherin-like 4.32e-19
Family Cadherin 0.0077
Further Details:      
 
Domain Number 17 Region: 625-727
Classification Level Classification E-value
Superfamily Cadherin-like 4.71e-19
Family Cadherin 0.0014
Further Details:      
 
Domain Number 18 Region: 1925-2033
Classification Level Classification E-value
Superfamily Cadherin-like 8.71e-19
Family Cadherin 0.0021
Further Details:      
 
Domain Number 19 Region: 2448-2569
Classification Level Classification E-value
Superfamily Cadherin-like 8.77e-19
Family Cadherin 0.0043
Further Details:      
 
Domain Number 20 Region: 941-1056
Classification Level Classification E-value
Superfamily Cadherin-like 5.85e-18
Family Cadherin 0.0026
Further Details:      
 
Domain Number 21 Region: 302-410
Classification Level Classification E-value
Superfamily Cadherin-like 5.85e-18
Family Cadherin 0.0034
Further Details:      
 
Domain Number 22 Region: 2242-2341
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000000871
Family Cadherin 0.0028
Further Details:      
 
Domain Number 23 Region: 113-201
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000000694
Family Cadherin 0.0079
Further Details:      
 
Domain Number 24 Region: 1312-1386
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000171
Family Cadherin 0.0037
Further Details:      
 
Domain Number 25 Region: 2041-2144
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000186
Family Cadherin 0.0046
Further Details:      
 
Domain Number 26 Region: 2765-2867
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000385
Family Cadherin 0.0019
Further Details:      
 
Domain Number 27 Region: 24-98
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000485
Family Cadherin 0.0096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000019370   Gene: ENSTNIG00000016276   Transcript: ENSTNIT00000019599
Sequence length 3212
Comment pep:known_by_projection chromosome:TETRAODON8:16:4982164:5026208:-1 gene:ENSTNIG00000016276 transcript:ENSTNIT00000019599 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
RRIVLIICVALELVTFHSPMVLGTLELQLDEEQPAGTVVGDISAGLPPGVTATLFFISDH
EGTGVSTDLHIDESTGIIQTAKILDREVRDRYNFIAVTMTGTAIGTRFPLEPAVDADQGQ
LTTQGYLIKDGNVGQAFTLETRRGSNGVLYLDLVVNTILDREKRSTYTLSLEAFDGGSPK
RTDVMSLDITVQDINDNAPVFNQSRYHAIISENLQPGSNILQVFATDDDEGDNGKVLYEI
NRRQSDPDRYFVIDSQSGVITLNKPLDFEMKRVHELVVQAQDNATQPEVSNAFVTIHVRD
YNDNQPTMTIIFLSEDGSPRVSEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFAL
TTKDNIIYLICVDRILDREERDTYELRVMATDSGTPPLRAESSFIIQVTDVNDNPPLFDQ
PVYRQVIPEVVFPGSFVLQVTARDKDHGPNGDITYSLFQDQGAHSKWFSIDSVTGIITTD
SQLDYEKNPNPSITVVATDGGKPPMSSTALVNIVLQDINDNEPVFEKHFYNVSIKENTAP
GTCILEVTARDADGGSFGSISYSLGSGIKSASPSQFTVGKETGQICTTAVLDRDQGPASF
DFTVTAVDGGGLSSVAYVKVDLVDINDNRPTFYPVNYAVSLSTQSAPGTSVVRVMAYDLD
SGENGRITYKTAPGGASPYFTLNKDTGVISLSRSVFGKANSVIPMIISAQDGGGLVSFTN
ARVNISVVAGLVAPPVFEHTQYYFSVPEDVLRGTVVGIVRASVKTDSSRDISYTISSGDP
VGYITVDPDSGALRTSLPLDHEAQPSLDLEVQARSGNPPAFGQTRVHISITDINDNPPVF
SPSSYESLLLPEPTEMGTVVYRVQAEDQDSGANGQLSFDLYSPSGTQRSFSIDRSSGEIR
LVGSLRYESTPRYDLQVIAKDSGVPQLSATFVLVVHVQAENDHGPVFDTLSYRVELKEGT
PINKRFLQVRALNRETPGSGYSSPLSYHLRPDGDSAAFGIASDSGWLFVKSTLDREVKDM
YLLTVLATQGHGQLKKTGSATVRVSLTDENDNSPRFTQDRVFMAVKENLPAGTGFGHVSA
ADRDAGPNGRLSYRLLHPDRHFQINPHTGELYLFLFASPGEMSTKTVLDREQQSSYQLVV
LVQDGGSPPRSATGTAFITVLDDNDNDPAFTHSPSGKKLILQVTESQSSGVLVGTLQAKD
PDEGENGTVFYSLIGPRADRFSLNPNSGELHSSSALSHSERAEYSLMVTATDRGQPPRST
SCSLTIQTVDFVDINGRDGHTYLKVTFNSVEQTAPGSIIGSVRHQGGTSKEGEVTYTVIG
GTDRDGTFVVDRLTGDVLLARPLDYEQYSRYSLQIEVDDLSQVMPSSTLVHLNIEVEDSN
DHAPQFPEDPITVVIPESMESGSSVYTFQATDKDGSEANSELSYSILHQWPSAHGLLSLD
SSTGVLSIAQKLDHEVTPSLILVVKATDSAHDASLRRWSSVTARVYITDENDNPPVFRSP
ASVSVMEDQPVGFVALYVKATDADEGENGRVTYRIQSGNTGGKFSLNPNTVFGLAYVIHP
TEIEIASLHALLFKAGSLSILKPLDREEQDIFNLTITAEDHGMPQQSSAQLLCVHVIDVN
DEVPWFEETQYEAQVSENQPSGTSVLTVSASDLDLGPNGQVTYSGISEEDFNINPVTGVI
TTTKALDRELREYYTVTVYAKDGGLPPNYAKATVRIRVLDENDNTPYFGRLYYSIEVPEN
LEAMPLFTLRANDQDSGKSGIINYKITVGDSSGDFHLDKLSGVLSTSRPLDREVRARYML
TVTAQDQGHPPLSSTATVEVSVLDINDHSPQFESSAYTADIPEDIPIGSHVLDVKATDLD
QGPNSRVLYFLSSSSHSSFIIDQDTGSIITAAPLDREKIASYTFKVCATDSSPLNPRNST
AEVTISVQDVNDNAPFFIQDPLIVNVSIGSVSSRRVLATMRAEDKDFGANGSVFYRFANP
VKGFTINSLTGDIQATEKLQSLSQSQRTLIVQAMDQGNPAQSSLGVVIIYLREQIYRGIR
FSRTTRDVTLQENALKGTVITQTQARYPDGSQIGITYSIFNGNRMQSFGINTITGEIWVQ
KSEGLDFEETPKLRLVVKAESASSSSYMAVNIILQDVNDNLPRFQLQNYVAYIREAQGYD
FPIIQVAAVDLDQGQNGQVIYSLRSSSRSGLFKIDPLTGSITTAAIMDREIWTETKLVVT
ATDRGTPRLAGSATLTVIITDLNDNSPMIPLPQEIHVPENTLIGTVITRVTGNDVDSGPA
LFYTLNLDVNSQDMFGIHRYGGGVSLTGPLDYEERTWYTVTVSTSDSKHHSEANLTVLVD
DVNDNAPTFTQDMYQVTVAEHLPAGSAVVTVTATDRDSGDNGKIIYRVMSSTKGIFYIDP
SNGTLFTNQKTTFDAENPSILVVVEARDQGAPSLSTIATVHVHVTDVNDNAPIFHQSEYR
VVSENDIPGSTILTLEAVDGDVTRDNCGFDFAIASGNSGNTFQIESSVRFLEGHGFQTVG
SLVLVEELDFEAVPSYNLTVVVSDRGIPQRSSVLILISVLDTNDNPPAFNRAEYSVVLSE
GVVVGTEILHLSATDPDSAPNGEVQYSICSGDETEMFHVDRWTGALRLQRALASESRSSH
VIIVQATDGQGQYALAPVNIEVKDINDNRPFFPLKLLTASIRENKPQNALVTVLHAVDHD
KGVFGKLNYYMLDKSSGGKETFSINQTSGEVRTRCSFDFEKVDSFSFVAVAMDAGNYSAT
VTVQVYVTGEDEYDPVFTSSDFSFKVPEGAKKGQIIGKVQAQDEDGGVDGIVLYSLVHAS
PYFEVNRSSGAISLRMDSHSTPVSRSKRELRLIALDVTAHSPLETSRIAVAKVIVDVTHT
SFGLTTDMNTLLISVVAVSLGTIAILITIAVALFFVRLRRHKKKQQKHRQTPVSDTMLHK
LEESKIAANEMIYHQTLPGYAADRSNNGGPYTRGGSLDPSHSSGRGSAEAAEDDEIRMIN
EHPRVSSISSSMQERISARGPDSGIQQDADQLSDVSCEPSIDWFRGKKMGSLNSTLLAGQ
VPVYRDEGGGYDGKPSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARL
KDETAPPHPRRSFHHKPKPESRIDPPPLITSVAHPGAKTVPPKPAAGRTFPHLGSFRRSP
LSSDGSISSVAMSPSFSPSLSPLAARSPAVTP
Download sequence
Identical sequences H3DFS6
ENSTNIP00000019370 99883.ENSTNIP00000019370 ENSTNIP00000019370

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.