SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000019384 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000019384
Domain Number 1 Region: 321-511
Classification Level Classification E-value
Superfamily CAPPD, an extracellular domain of amyloid beta A4 protein 3.92e-83
Family CAPPD, an extracellular domain of amyloid beta A4 protein 0.0000000862
Further Details:      
 
Domain Number 2 Region: 9-102
Classification Level Classification E-value
Superfamily A heparin-binding domain 3.92e-41
Family A heparin-binding domain 0.00000615
Further Details:      
 
Domain Number 3 Region: 252-309
Classification Level Classification E-value
Superfamily BPTI-like 2.13e-21
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.0006
Further Details:      
 
Domain Number 4 Region: 103-172
Classification Level Classification E-value
Superfamily Amyloid beta a4 protein copper binding domain (domain 2) 1.22e-19
Family Amyloid beta a4 protein copper binding domain (domain 2) 0.00033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000019384   Gene: ENSTNIG00000016290   Transcript: ENSTNIT00000019614
Sequence length 713
Comment pep:known_by_projection chromosome:TETRAODON8:16:5144635:5158447:-1 gene:ENSTNIG00000016290 transcript:ENSTNIT00000019614 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
ANAGTGFAVAEPQVAMFCGKLNMHVNIQTGRWEPDPSGTQSCVGTKEGVLQYCQEMYPEF
QITNVVEADQSIRIENWCKKKKVCKGHAHVVVPYKCLVGEFVSDILLVPEKCKFFHKERM
DMCVSHQQWHGVAKEGTLTSQLLIRAPWCCTLRHVASCGIDKFHGTEYVCCPSSQAGASA
VSPSQEDDEDEEIENEEIDEADLVEEENRQAGITFHPHERLNYPPLHSEAPADEQPTQKM
SESQEDKTLQEVKEVCTLEPETGPCRASMPRWHFDMNQKKCVHFIYGGCAGNRNNFDSEE
YCMAVCKRLITVPTPQPTDDVDIYFETPADDKEHSRFQRAKEQLEIRHRSRMERVRKEWE
EADRQAKNLPKAERQTLIQHFQAMVESLEEEAASEKQQLVETHLARVEAMLNDRRRLALE
NYLAALQADPPRPHRILQALRRYVRAENKDRQHTIRHYQHVLAVDPEKAAQMKSQVMTHL
HVIEERMNQSLSLLYKVPYVADEIQDEIDELLQEQKTDMDQFLSSISESQPDITVSSEES
VEVSVSEGKPYRPFQVTSLGSRSEAEDSPRAFKKGSAMSGLDGLIGAEERIINSKTKING
NTVIDESLDVKEVVYSAERVSVIHDDEPESYRPLGEDFSFGSSALIGLLVIAVAIATVIV
ISLVLLRKRQYGTISHGIVEVDPMLSPEERHLSKMQNHGYENPTYKYLEQMQI
Download sequence
Identical sequences H3DFU0
ENSTNIP00000019384

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]