SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000021904 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000021904
Domain Number 1 Region: 33-186,218-344
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 7.85e-61
Family FCH domain 0.0043
Further Details:      
 
Domain Number 2 Region: 498-681
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 3.73e-51
Family BCR-homology GTPase activation domain (BH-domain) 0.0000525
Further Details:      
 
Domain Number 3 Region: 722-787
Classification Level Classification E-value
Superfamily SH3-domain 5.51e-16
Family SH3-domain 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000021904   Gene: ENSTNIG00000018725   Transcript: ENSTNIT00000022140
Sequence length 1070
Comment pep:known_by_projection chromosome:TETRAODON8:19:565493:577113:-1 gene:ENSTNIG00000018725 transcript:ENSTNIT00000022140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSNLNKSKKDKEILAEYESQVKDVRTQLVEQQRCLEQQTEMRVQLLQDLQDFFRKKAEIE
TEYSRNLEKLAERFMAKTRSTKDHQQYKKDQNLLSPVNCWYLLLNQVRRESKDHATLSDL
YLNNVISRLTHISEDSARLLKRSKEIICQLQEDLMKLLNELYTVMKTYHMYHAETISAET
KLREAERQEERVKGVSGIGGGGEPVFSLRIEERHQRRNAARKMEKMREKRKAKYSENKLK
TLKARNEYLLTLEATNASVFKYYIHDLPDIIDCQCCDLGYHSSLSRALRTYLSAELSLEA
SRRAGLEVLEGAVEGLDPARDRQRLLGLYPTAFCPPQRFGFQAHMGDAVTQIISQQQVQA
ELTLRLTQLQTRLASLKIENEEVKKTWGATLTTLQDMTVLDDCDVSQSFTHSPSSESVKS
SVSDGYLNKPSLAKRRANQQETELFYFNKFSEYLEGSNLISKLQAKHDILKKALAEGYKA
ELLTTSRGRKNSHSKHQDSTKAIPLLVESCIRCINLHGLQHQGIFRVSGSQVEVNDIKNS
FERGNDPLIDEESNHDINSVAGVLKLYFRGLENPLFPKDRFNDLISCVRIENMYERAQCI
RKILLGVPRATLVVMRYLFAFLNHLSQYSDENMMDAGNLAIVFGPTLLPTPEALDQVACQ
AHVNEVVKTVILNHDNIFPDTKELPGPVYEKCMTGDQYCESPFSEPGALEEAEHDGGTET
QTSDEEGEAVEAVARFDYVGRSCRELSFKKGASLQLYQRASHDWWEGRHNGNHGLVPHQY
IVVKDRADGMSDALSQKADSDGGSSSTDDKRSRSELSSPTDIRPPETYNRSVIHRRKRTD
GLFRRPLGRSNDSHCHGNGGVMERSSPPVTGHFSPRELLLGRGQGLTPPLDSPERRRRSA
AAVTMTVSRHDSLRRPEDTPIRRSSSGQHGFGESHRSRVMDADALAQDIEETVTVALGEL
RHLERQGCRPAPDVVLDTLDQVKNGPIATCSSESPSPHSTPTLPGPPPGPPRPANPSPDT
LGSFKPVATNTNTNRIVAPLRPPALRPKPVVPPKSSTPPLPPPLDKSCTM
Download sequence
Identical sequences H3DN06
ENSTNIP00000021904 99883.ENSTNIP00000021904 ENSTNIP00000021904

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]