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Domain assignment for ENSTNIP00000022601 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000022601
Domain Number 1 Region: 41-332
Classification Level Classification E-value
Superfamily WD40 repeat-like 5.5e-46
Family WD40-repeat 0.0041
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000022601
Domain Number - Region: 1116-1181
Classification Level Classification E-value
Superfamily Functional domain of the splicing factor Prp18 0.0235
Family Functional domain of the splicing factor Prp18 0.02
Further Details:      
 
Domain Number - Region: 614-646
Classification Level Classification E-value
Superfamily MukF C-terminal domain-like 0.0484
Family MukF C-terminal domain-like 0.0078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000022601   Gene: ENSTNIG00000019396   Transcript: ENSTNIT00000022840
Sequence length 1213
Comment pep:known_by_projection chromosome:TETRAODON8:2_random:1167517:1176069:-1 gene:ENSTNIG00000019396 transcript:ENSTNIT00000022840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRLKEIQRTAHQAWSPAGHHPTYLALGTAAQQLDASFSTTAALEIFEMDFSDPSLEMQLK
GSFKTPNRLHSIVWVDFGMGADGTGGRLVGGSENGILTLYDPDTIMSSGADAVVGQSDKH
TGPIRALDFNPFQSNLLASGANDSEIYIWDLNNFSSPMTPGAKTQPVEDISVVSWNRQVQ
HILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLASEDDRLPVI
QMWDLRFATSPLKVLENHTRGILSISWSQADSELLLSSAKDNRILCWNPNTGEVIYELAT
TNQWCFDVQWCPRNPALLSTASFDGKITVYSVMGGSLKAQQQSTADKISSSFDTMDPFGT
GQALPPLQVPRPTVQDTIVPPLKKPPKWMRTPIGASFGFGGKLIIFENPKVPPMQSPQPI
PRQVFLSQVSTETEFLQRSKELQAALQSGSFHSYCQTKIQNARSDAEQDIWKFLLVNFED
EARIKFLKLLGFSKDDIEKKISKCLGKSFHPNGYGVDAKDLAEKMQQLTTERAEEGADAR
TSGSVSPSDFFSQTPKENSNFQIPVSCDTDGLISQALLVGNFEGAVDLCLSDGRYPEAIL
LSISGGEELLKKTQQKYLLQQKNSVSMLISSVVTRNWRDIVQSCELDNWKEALAALLTYS
HPEDFACLCDILGGRLEHEKTEKRCLQACLCYICSGNIEKLVECWTSHRDSSSPLGLEDL
VEKVMILRKSIERLRNCEVAVQSPILAEKLTCYAGILAAEGSLTTAMTYLPENSDQPGIR
MLRDRLFHAQTEAVQNRVGGSTSKTTAAQVPAPKAQVMGQYQPAAAVQQQPPLPSVFTPV
SAANASTGMRPSHFLPSAARPSMRPSYPQQAAPGFHPHQPFQPQPTTTGRPATFPPSVPA
ANLSGPPLQPPSSAPGALPPMPSPGVPPTSFMAPTSLPSSLMSPTSQTGAALPVYPGSLQ
NQPGPPMAPGPFAPPGPGYPQGGPGAPAVKLYQHLGPQEGWNDPPAVRGGPRKKVPIPDN
YTPPAPITAPVMGFPAEGPQPHDHAQVPPGAPQEPSMQVSTTTAVCVDLHQRIAEQGARM
WFLVRSRFLQLLQQLPTERVEQKEIPAEHMILKSTFDSLVQRCQLAARDPQTKRKLDDSA
KRLGYLYDKLREQSLSQNILSGLHEISRCVASQNYQRGLEVHTQVVSSSNFSEISAFMPI
LKVVMTIANKLGV
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Identical sequences H3DQ02
ENSTNIP00000022601 ENSTNIP00000022601 99883.ENSTNIP00000022601

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