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Domain assignment for ENSTNIP00000002109 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000002109
Domain Number 1 Region: 572-632
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000000162
Family Complement control module/SCR domain 0.0011
Further Details:      
 
Domain Number 2 Region: 28-75
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000115
Family TSP-1 type 1 repeat 0.0019
Further Details:      
 
Domain Number 3 Region: 501-546
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000209
Family TSP-1 type 1 repeat 0.00091
Further Details:      
 
Domain Number 4 Region: 626-683
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.00000175
Family Complement control module/SCR domain 0.0031
Further Details:      
 
Domain Number 5 Region: 81-118
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000116
Family LDL receptor-like module 0.0016
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000002109
Domain Number - Region: 452-490
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000533
Family EGF-type module 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000002109   Gene: ENSTNIG00000005137   Transcript: ENSTNIT00000000273
Sequence length 844
Comment pep:known_by_projection chromosome:TETRAODON8:12:8686203:8690460:-1 gene:ENSTNIG00000005137 transcript:ENSTNIT00000000273 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LSVVTPFLLFLFISKGKNEMFVLCNLGINCQWGPYGDWSECDGCTKSQTRSRVVAVYAQF
GGNSCPGGRTETRPCETTRGCPLEDGCGGRFRCRSGKCISQSLVCNGDQDCEGDGLDEHC
PSDRFIICTQSTLPPNVELLGLGFDVVSEQTRASVINTKSFGGQCRTIYSGVHQTIYRLP
VSTLQYSFMVKVQNDFSDEMFSSKWHYAKSIVQRERASGTTTGYRNYDFRETEDRTRVRS
SYRKPQMQKLLVLKNEIEVAQFQSNSPQYIPLSEELWKALVKLPSVYDYAAYRKVLERFG
THYLSEGSLGGTFKVVAKIDEETQRYMRTESSEYNECEETKYWILFFSFTRKTCRSGSSN
SRFSTGTRSGNHLSRVDVVGGGVQHSAALSTMSLDDPNKNWEMYSNWADSVRSFPQVTKQ
KLRPLSELVKEVQCAGVKKMYLRRAIEQYLSESDPCHCQPCRNNGLVFTDGNTCKCVCKP
GTSGLACEQGTEIEGQQGVIQGSWACWSTWSSCNGARRSRSRSCSNPAPQNGGQYCSGES
TETSDCDEDELSYLKTMEPQCFDQTLPESHKCETPPPLINGYIMEPKDIYLVGSKVEYTC
ISGFHLGSSTIECTENKTWSSRPGLCIRSACQLGSLAEGVMAYPINGAYSIGDTVTLSCP
EGRQLLGESEITCDPSLNFSPDPASISCSPVKRQQTLLPPEVQCQPGKKPSKGKCVCKMP
FECRSSLEVCTTVAVTNRPFLLTVCKMHALRCLGKRYLIAEDGVCEWPQRNTTGCTNCHL
WELCDDQTNECRCKDSADCSDPGVNVCVRVGADGQNQTMSECEAGLKRCKGEQVSVVSIL
PCTG
Download sequence
Identical sequences H3C1J3
ENSTNIP00000002109

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