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  Home > Genomes > Tetraodon nigroviridis 76_8 > ENSTNIP00000011222

Domain assignment for ENSTNIP00000011222 from Tetraodon nigroviridis 76_8

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000011222
Domain Number 1 Region: 491-655
Classification Level Classification E-value
Superfamily A middle domain of Talin 1 2.62e-66
Family A middle domain of Talin 1 0.000000478
Further Details:      
 
Domain Number 2 Region: 754-890
Classification Level Classification E-value
Superfamily I/LWEQ domain 1.18e-54
Family I/LWEQ domain 0.00000227
Further Details:      
 
Domain Number 3 Region: 662-784
Classification Level Classification E-value
Superfamily I/LWEQ domain 1.22e-47
Family I/LWEQ domain 0.00000607
Further Details:      
 
Domain Number 4 Region: 1839-1973
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 2.35e-46
Family VBS domain 0.00000908
Further Details:      
 
Domain Number 5 Region: 1226-1362
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 7.85e-43
Family VBS domain 0.019
Further Details:      
 
Domain Number 6 Region: 198-312
Classification Level Classification E-value
Superfamily Second domain of FERM 7.07e-31
Family Second domain of FERM 0.00000135
Further Details:      
 
Domain Number 7 Region: 1074-1208
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 3.37e-28
Family VBS domain 0.0089
Further Details:      
 
Domain Number 8 Region: 313-403
Classification Level Classification E-value
Superfamily PH domain-like 5.16e-24
Family Third domain of FERM 0.0000178
Further Details:      
 
Domain Number 9 Region: 1470-1556
Classification Level Classification E-value
Superfamily I/LWEQ domain 0.0000000000000124
Family I/LWEQ domain 0.0081
Further Details:      
 
Domain Number 10 Region: 1695-1815
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.0000000251
Family VBS domain 0.038
Further Details:      
 
Domain Number 11 Region: 2004-2133
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.000000534
Family VBS domain 0.022
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000011222
Domain Number - Region: 1583-1660
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 0.000173
Family VBS domain 0.057
Further Details:      
 
Domain Number - Region: 81-136
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.000195
Family Ras-binding domain, RBD 0.086
Further Details:      
 
Domain Number - Region: 946-1043
Classification Level Classification E-value
Superfamily I/LWEQ domain 0.00824
Family I/LWEQ domain 0.0042
Further Details:      
 
Domain Number - Region: 2107-2228
Classification Level Classification E-value
Superfamily I/LWEQ domain 0.0432
Family I/LWEQ domain 0.0065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000011222   Gene: ENSTNIG00000008387   Transcript: ENSTNIT00000011404
Sequence length 2333
Comment pep:known_by_projection chromosome:TETRAODON8:13:7313092:7353029:-1 gene:ENSTNIG00000008387 transcript:ENSTNIT00000011404 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MVALSLKICVRQCNVVKTMQFEPSTPVYDACRIIRERVPEAQTGQASDYGLFLSDDDPRK
GIWLESGRTLDYYMLRNGDVLEYKKKQRPQKIKMLDCAIKTIMVDDSKTVGELLVTICSR
IGITNYEEYSLIQEVTEDKKEDGMGTLKKDRTLLLRDERKMEKLKAKLHTDDDLNWLDHS
RTFREQGVEESETLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACE
FAGIQAQIQFGPHVEHKHKPGFLDLKEFLPKEYTKQRGSEKKIFQDHKNCGEMTEIEAKV
KYVKLARSLQTYGVSFFLVKEKMKGKNKLVPRLLGITKESVMRVDEKTKDVVQEWPLTTV
KRWAASPKSFTLDFGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQSKDRFGLEGDEE
ATMLEESVSPKKSTILQQQFNQTGRGLHRSAAGGFVLESRRPRPYNMGTMPSAQQQVTTG
QMHRGHMPPLSLAQQALMGTINSSMQAVQQAQADLGYADNPPPLGHDLASRAWVQNKVDE
SKHEIHSQVGAITAGTASVVNLTAGEPTETDYSAVGCAITTISSNLTEMSKGVKLLSALM
DDDVGSGHKLMGAARMLAGAVSDLLRSVEPAAAEPRQTVLTAAGSIGQASGDLLRHMGEG
EIDEKFQETLMNLAKAVANAAAMLVLKAKNVAQVAEDTVLQNQVIAAATQCALSTSQLVA
CTKVVSPTISSPVCQEQLVEAGKLVDRSVETCVKACRSASDDGELLKQVSAAAGVVGQAL
SDLLQHVRHYASCGEPIGRYDQATDTIMNVTENIFTSMGDAGEMVRQARVLAQATSDLVN
AMRSDAEAEIDVDNSKKLLAAAKLLADATARMVEAAKGAAANPENEDQQQRLREAAEGLR
VATNAAAQNAIKKKLVNRLELAAKQAAAAATQTIAAAQNAAASNKNTVAHQHLVHSCKAV
ADSIPQLVQGMRSSQAQPEELGAQLALIMASQSFLQPGSKMVTSAKSAVPTVADQAAAMQ
LGQCAKNLATCLAELRTATQKAHEACGPLEIDSALKTVQTLKSELQDAKMSVIDSQLKPL
PGETLEKCAQDLGSTSKAVGSSMAQLLTCAAQGNEHYTGVAARETAQALRTLAQAARGVA
ASTKEPQAAAAMLDSAQYVMEGSAMLIHEAHQALVHPGDAESQQRLAQVAKAVSHSLNNC
VNCLPGQKDVDMALRSIGEASKKLLVDILPPCSKTFQEAQTDLNHTAAELNHSAGEVVHS
SRGTSGQLAAASRKFSQDFDEFLDAGIEMAGHTQSKDDQIQVIGNLKNISMASSKLLLAA
KSLSVDPGAANAKNLLAVAARAVTESINQLITLCTQQAAGQKECDNALRELEAVRGLLEN
RNEPVNELSYFDCIESVMENSKVLGEAMAGISQHCKTGDVAAFGDSVGVASKALCGLTEA
AGQASYLVGVSDPNSQSGYEGLVDPIQFAKAHQAIQMACQNLVDPASSPSQVLSAATIVA
KHTSALCNACRLASSKTSNPVARRQFVQSAKEVANTTANLVKTIKGSDEDFSEENRNRCR
VATTPLLEAVENLSTFANNPEFASIPAQISNEGSAAQEPIVRSARAMLDSSTYLLETARS
LVLNPKDPPTWSILAGHSRTVSDSIKSLITSIRDKAPGQRECDYSIDNINKCIRDIEQAS
LAAVGQTLPCRDDISMEALQEHLTSSVQEIGHLIDPVSTAARGEAAQLGHKVTQLASYFE
PLIVASVGLASKLHDHQQQMTILDQSKTLAESALQMLYAAKEGGGNPKASHTHDAIAEAA
QLMKEAVDDIMVTLNEAASEVGLVGGMVESIAEAMGRVDEGTPPEPEGSFVDYQTTMVKF
SKAIAITAQEMMTKSVTCPEELGGLASQVTVDYVQLAHQGRLAAATAESEEVGFQIKTRV
QELGHGCIYMVQKAGALQLSPTDSFSKRELIECARAVMEKVSLVLSALQAGNKGTQACIT
AASAVSGIIADLDTTIMFASAGTLNPENEDSFADHRESILKTAKALVEDTKLLVAGAASS
QEKLAQAAHSSAKTITQLTEVVKLGATSMGSEGPETQVVLINAVRDVAKALAELIGATKC
AAGKAADDLSMYQLKSAAKVMVTNVTSLLKTVKAVEDEATRGTRALEATIECIKQELTLF
QSKDVPEKSTTPEEFTRMTKGITTATAKAVAAGNSAQQEDVIATANLSRKAISEMLATCK
QAAYHPEVSEELRNKALQYSSECTTGYISLLEQVLQVLQKPTAEQKQQLAVHSKHVAACV
TELIQTAEAMKGSECVDPQDPTVIAETELLGAATSIEAAAKKLEQLKPRAKPK
Download sequence
Identical sequences H3CSI8
ENSTNIP00000011222

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.