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Domain assignment for ENSTNIP00000016218 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000016218
Domain Number 1 Region: 391-651
Classification Level Classification E-value
Superfamily YWTD domain 8.63e-38
Family YWTD domain 0.0000263
Further Details:      
 
Domain Number 2 Region: 336-385
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000262
Family EGF-type module 0.0046
Further Details:      
 
Domain Number 3 Region: 145-182
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000353
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 4 Region: 224-261
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000602
Family LDL receptor-like module 0.00094
Further Details:      
 
Domain Number 5 Region: 67-104
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000038
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 6 Region: 109-142
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000681
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 7 Region: 26-62
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000038
Family LDL receptor-like module 0.0019
Further Details:      
 
Domain Number 8 Region: 268-298
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000118
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 9 Region: 190-221
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000144
Family LDL receptor-like module 0.0018
Further Details:      
 
Domain Number 10 Region: 312-347
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000177
Family EGF-type module 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000016218   Gene: ENSTNIG00000013235   Transcript: ENSTNIT00000016430
Sequence length 703
Comment pep:novel chromosome:TETRAODON8:4:784618:789727:1 gene:ENSTNIG00000013235 transcript:ENSTNIT00000016430 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
SSVTSVMERETVAMGQMKTDVTKGPKCRRGSRMCRDGTQCVLFSHVCDGERDCGDGSDED
GCGSSLCISPGEFQCSHGKMCIPEAQVCDGRPQCWDQSDEIDCRRPTMTCEFHCADGSRC
IPKKFVCDGERDCPDGTDEFGCETVSCFPAEFQCAHGNRCIPRGQVCDGKNDCQDRSDEL
DCQSLPEGCHHLCDNKARCIPETFLCDGERDCADGSDEEKCGLVACESHQYRCASGQCVS
EGLRCDGYPDCSDHSDEEDCARPPRCPAQLRCPNSHECLQREWLCDGEDDCEDGSDEKVK
PRKKRQTWTEVGWCDHHCVSTPEGPRCSCAAGFRLHSNALSCVDVDECNEMPPSLCKHIC
MNTPGSYVCYCYPNFYLEPDDMSCKTKGDEPLLLASVQSELWLLGVHSGSLTLLSSVNRP
VFSLDYHWARQRVYWLSPDYQSIRWADMKKSSSRGTLIKGVKSDSIAVDWIGQNLYWVDG
LVGQILVVKLSDITARSQSYAVALGEDLEQPSSLILLPHLGLMLWSEIGSTPQIERSGMD
GSKREVVVSRDLSWPVSLAYDFLDNRVYWADEKLRCIGSTSLDGDDIKILQLAETPNPFS
VAVFNDRVFWSDTKRRTIRSADKNTGKDQKVLLKRPGQPFGLRVMHELSQPAFSSPCNQL
HCSHLCLLAPALRPKSGTAGDQGTTAVCRCPKGMLLNPDKAAC
Download sequence
Identical sequences H3D6S7
ENSTNIP00000016218 99883.ENSTNIP00000016218 ENSTNIP00000016218

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