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Domain assignment for ENSTNIP00000016441 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSTNIP00000016441
Domain Number 1 Region: 93-128
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000144
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 2 Region: 35-84
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000249
Family TSP-1 type 1 repeat 0.0016
Further Details:      
 
Weak hits

Sequence:  ENSTNIP00000016441
Domain Number - Region: 544-586
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000103
Family TSP-1 type 1 repeat 0.0025
Further Details:      
 
Domain Number - Region: 488-526
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000684
Family EGF-type module 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000016441   Gene: ENSTNIG00000013446   Transcript: ENSTNIT00000016654
Sequence length 586
Comment pep:known_by_projection chromosome:TETRAODON8:4:5432110:5435135:-1 gene:ENSTNIG00000013446 transcript:ENSTNIT00000016654 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRTEVALQLGFCALCVTLTLLGEGMGVELSDPPAVDCVWGPWTPWRSCDPCTRTRRRSRG
VEVFGQFGGSACQGSVGDRESCLTDARCIQPPPPECSDTEFQCESGYCIKKRLLCNGDYD
CEDGSDEDCDPGRKICPPSVLETNEQARTAGYGINILGSDPRMNPFNNDFFNGRCDKVRN
PKTLQYERLPWNVGVLNYQTLVEETTSREIYEDSHSLLREMLKEMSIKVDAGLSFKFKST
EPSMSNVSLNLDASLEYEKKTMIKEISELTNIQNKSFMRVKGRLQLSTYRMRSYQIQVAE
EFLAHAKSLPLGYEKGIYYAFLEDYGTHYTRNGKSGGEYELVYVLNQDSIKARNLTERKI
QECLKIGIEAEFATTSVKDGKAHVNYNKCDDVTTKSQGDVYGKALVDSVLTSVKGGTLES
AVAMRAKLNKEGVMDIGTYQNWARTIADAPALINSEPEPIYMLIPTDLPGANERISNLKQ
ATADYVAEYNVCKCKPCQNGGTLALLDGKCICMCSNLFEGLGCQNFKGDKLRTPVARPAV
TQEGNWSCWSSWSGCQGQKRSRTRHCNIEGVPGAVCRGDTRSEEHC
Download sequence
Identical sequences H3D7F0
ENSTNIP00000016441 99883.ENSTNIP00000016441 ENSTNIP00000016441

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