SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTNIP00000016967 from Tetraodon nigroviridis 76_8

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTNIP00000016967
Domain Number 1 Region: 496-823
Classification Level Classification E-value
Superfamily L domain-like 2.21e-40
Family Ngr ectodomain-like 0.01
Further Details:      
 
Domain Number 2 Region: 28-425
Classification Level Classification E-value
Superfamily L domain-like 9.52e-36
Family Ngr ectodomain-like 0.0033
Further Details:      
 
Domain Number 3 Region: 887-1032
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 5.1e-33
Family Toll/Interleukin receptor TIR domain 0.0000686
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTNIP00000016967   Gene: ENSTNIG00000013960   Transcript: ENSTNIT00000017181
Sequence length 1048
Comment pep:known_by_projection chromosome:TETRAODON8:2:12682773:12704308:-1 gene:ENSTNIG00000013960 transcript:ENSTNIT00000017181 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LFLLFIILGICCPLCILTANVSYPKTLPCDVTNNGSVVNVDCTERSLTDVPHGIPRDVSN
LTLTINHIPNFNSTSFQGLDNLREVDMRCNCVPVKIGPKDHICTKSVTIEENTFNSLKNL
QSLYLDGNQLYSIPKGLPSSLILLSLEVNHIYYISKANLSEIRNVEILYLGQNCYYRNPC
NFSYGIEDGAFLELYNLKLLSLKSNNLSFIPHHLPSSLKELYLYNNNFQSVSAEDFKNLT
NLEILDISGNCPRCYNVPFPCNPCPNNAPLKISKEAFKTLTKLKTLRMHSNSLTHVAPEW
FASIKELRVLDLSSNNLARDIGVTVFPNFLCKLQELDLSFNYELQKYPQTLRLSHTFESL
RSLKILRLQGFVFQQLRPKSITPLKHLTNLEVLDLGTNFIKMTNLSILMELKSFKIINLS
NNKISSPSDGQEPVGLSGGQSWEWSPMLAADQYQNDQVREIHYFRYDEYARSCKYKDKEL
GVIASFVKKECSQFGKTLDVSRNNIFFLHSRFLNLRELKCLNLSGNAMSQSLNGSEFTYL
SGLQYLDFSSNRLGLLYSTAFQELKSLVILDISYNNHYFESEGLTHMLNFTGNLRNLKIL
MMNHNKISTSTNTELESQSLERLEFRGNRLDVMWRDGDTRYLNYFKKLSNLAILDISHNN
LNSIQRQVFSGLPDTLSELYMTNNKLKSFAWEELYLLRSLLVLDLSENYLTTVPRILSNC
SKSLNKLILHKNQILKLTPNFLEYAYNLKYLDLSFNHIEQIEKSNFPDDVVNGMDVLLLH
KNRFQCSCGAIWFIIWLNQTKVTIPRLATDVTCASPGAQRGHPVVSVDLSACQHNYLSII
LYILMTSFILTFFTLSISSHLFLWDIWYIYHFCRAKLKGYNRLYSQSSVYDAFMVYDKED
PAVSEWVMKEMCVQLEGREDRRLALCLEERDWIPGTPLLDNLSQSIHKSKRTVFILTSTY
IKSGSFKTAFYMAHQRLMDEKNDVIVLIFLEKIPSNSKYLRLRRRLYRRSVLEWPTNPQA
RPYFWFSLRSVLATESHKQYNNLFKETL
Download sequence
Identical sequences H3D8X6
ENSTNIP00000016967 ENSTNIP00000016967 99883.ENSTNIP00000016967

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]