SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSTRUP00000020875 from Takifugu rubripes 76_4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSTRUP00000020875
Domain Number 1 Region: 21-115
Classification Level Classification E-value
Superfamily SWIB/MDM2 domain 3.92e-43
Family SWIB/MDM2 domain 0.0000712
Further Details:      
 
Domain Number 2 Region: 222-265
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 5.89e-19
Family Ran binding protein zinc finger-like 0.00025
Further Details:      
 
Domain Number 3 Region: 132-211
Classification Level Classification E-value
Superfamily SWIB/MDM2 domain 0.0000124
Family SWIB/MDM2 domain 0.028
Further Details:      
 
Domain Number 4 Region: 379-430
Classification Level Classification E-value
Superfamily RING/U-box 0.0000181
Family RING finger domain, C3HC4 0.0096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTRUP00000020875   Gene: ENSTRUG00000008338   Transcript: ENSTRUT00000020962
Sequence length 436
Comment pep:known_by_projection scaffold:FUGU4:scaffold_21:238566:241229:1 gene:ENSTRUG00000008338 transcript:ENSTRUT00000020962 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPASCLTDSIIVSSRAASCLDLQVRPNVEFHRLLQDAGAIKDVFTMKEVMFYLGQYIIQK
QLYDQKQQHIVHCSHDELGRVLGVDSFSVKEPRVLFAMIMKNLVAVKNPGNEESEDEEEG
DVRKRRRSDSYSLTFDDSLSWCVIGGLGGGRDRHSSQSSDSHSTSVRSEVTLADPDSDSD
NFSVEFEVESIASDDYNEDDASVSADDQVYEVTIFEAEDEDSFDEDTEITEADYWRCVKC
DELNPPLPRNCLRCWTLRRDWLPEELSKSASSSPKALPPSSDLETDGVDLPDGKNAKTLP
SSQCLSDSTLSVPDSSQDLCSSSQDLCSSSQPASSSSQLFPSSLDSQEPASTSPAGDPAS
ATPELERSVSAEWRLPDSCLDPCLICQSRPKNGCIVHGRTGHLISCYVCARKLKKRNKLC
PVCRMPIQSVILTYLS
Download sequence
Identical sequences H2T885
ENSTRUP00000020875

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