SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSTRUP00000029044 from Takifugu rubripes 76_4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSTRUP00000029044
Domain Number 1 Region: 62-324
Classification Level Classification E-value
Superfamily RNI-like 6.67e-36
Family Cyclin A/CDK2-associated p19, Skp2 0.074
Further Details:      
 
Domain Number 2 Region: 286-397
Classification Level Classification E-value
Superfamily L domain-like 0.0000000000578
Family Internalin LRR domain 0.046
Further Details:      
 
Domain Number 3 Region: 15-47
Classification Level Classification E-value
Superfamily F-box domain 0.000000406
Family F-box domain 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSTRUP00000029044   Gene: ENSTRUG00000011507   Transcript: ENSTRUT00000029160
Sequence length 401
Comment pep:known_by_projection scaffold:FUGU4:scaffold_105:583249:589880:1 gene:ENSTRUG00000011507 transcript:ENSTRUT00000029160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
NSSCSCIYGVEPSFLVAIFRYLNVRDLLNCAEVCCEWKSFIQSEKEWLGDNTVQQILRNY
RTIVIHLNLRGCTSLNWPSFQSIIQFCLGECKNLQELNISECVHVTENITGNVMVKENCL
NLQYLSLAYCNRVTDEGFLCLAKEKVCYNLIYLDLSGCTQMTVNGFMSISAGCRLLREAL
IDGCPSLSAISLLGVPHLSNATLEAIVENTSLDTFRLQGNNQLTDVSWQALCRSSRDLRW
LHIAECPRLTDASLKSFATLKHLQHLNVSLCSRVGDVGIQYLIPISLCNLEHLNLSYCEQ
LTDLCLEWFGGSSIRSLDISGCNIQDRGLALLEGVQLKKLALAGCVRITDAGIEVLCKNV
RCLEHMDVSHCAALTEQAIRAISFYCRGLSTLQMAGCPKVY
Download sequence
Identical sequences H2TWI5
ENSTRUP00000029044

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]