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Domain assignment for gi|571026800|ref|YP_008898918.1| from Thermosynechococcus sp. NK55

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|571026800|ref|YP_008898918.1|
Domain Number 1 Region: 376-641
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.00000000000314
Family Galacturonase 0.017
Further Details:      
 
Domain Number 2 Region: 580-783
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0000471
Family Galacturonase 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|571026800|ref|YP_008898918.1|
Sequence length 862
Comment DUF3442 domain protein [Thermosynechococcus sp. NK55]
Sequence
MRSWYKLLGSCLLGLTVILGFNDVAIGRPAAAKLLGSRIQPRGTIRFNSEGAGFDNYLSA
ETFIPLFQKPGASIGFFEGKLLMPTSNTALAYNLMLGYRMLIANQKFSLGGYLSYDFRNT
GSTGFNQLGIGLELLGNVDVRINGYVPLGNRQVLLNEAVGLVGTIENNQILLNRNRLFQE
ALTGFDLEVGTPLVALGKDYLRGYAGLYYYTGESIADFVGVRARLSLRPIEYLSLSATVQ
NDDRFGTRAWFGIGVSFPGIAGSRRRTPESGQNIAVRLGESLERVGFVTIDNERVQDQIP
AINPTTSQPYRIFTVDTGTGSAARINDLPLAQHDIVLVGVLDTDGNTAGQGSVNLQDGVQ
LLSTTVDRQLPSTIGTITIPALTPSIQRPIISANIVLARNNTIDGFNIQPPAGQVAIIGN
NIDSARIINNQIAAINAAGIQITNAQSPIVRGNAVTITSTTVPAFNRRGISITESTNAVI
EDNIVNGGIGEGIGLDNALGNVIIRNNTVRNVSQTATDTNLEASIFIRNNRGNANITIED
NVTENNLTPGNRVDGIEFNLCRGNSFNVADRFTDNQFANCTTPASATVIVRNNQIRNIGT
GTDGSDGIDFNIGDGANLTAILEGNVINSISDAGITFDIVSSATPIASPTANITIRNNQI
SNILNDDGITLESNSAGQVVLNIENNVMSGIGGSNDGIDIEFTTNAASPAPARVRIVGNE
LSNVSDRGIEIDTNNQAALQLEVSNNRIQTTSVGEAVRLRATATAPNASRLNATVNNNIL
TQGNSATRSLELRADGNATLCANVFGNTQTSGAGFRLNNTSIVALPNLSANNGGVVINTS
GTVTNITATTFSAPPPAGCTFP
Download sequence
Identical sequences V5V217
WP_024123828.1.87165 gi|571026800|ref|YP_008898918.1|

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